RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ATP5EP2Q5VTU8 51 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 C1orf158Q8N1D5 194 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
EXTL3-201ENST00000220562 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 SHISA2Q6UWI4 295 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 SPTSSBQ8NFR3 76 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 CACNA1GO43497 2377 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 FAM236DA0A1B0GTK5 79 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 FAM236CP0DP71 79 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 C3orf84H3BNL1 204 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 UQCRQO14949 82 aa13.18□□□□□ -0.3
EXTL3-201ENST00000220562 PRM2P04554 102 aa13.17□□□□□ -0.3
EXTL3-201ENST00000220562 Q8N6K4 173 aa13.17□□□□□ -0.3
EXTL3-201ENST00000220562 TRBV6-5A0A0K0K1A5 114 aa13.17□□□□□ -0.3
EXTL3-201ENST00000220562 UBE2D4Q9Y2X8 147 aa13.17□□□□□ -0.3
EXTL3-201ENST00000220562 RBX1P62877 108 aa13.16□□□□□ -0.3
EXTL3-201ENST00000220562 TRAV10A0A0B4J240 114 aa13.16□□□□□ -0.3
EXTL3-201ENST00000220562 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
EXTL3-201ENST00000220562 CCKP06307 115 aa13.16□□□□□ -0.3
EXTL3-201ENST00000220562 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
EXTL3-201ENST00000220562 C11orf21Q9P2W6 132 aa13.16□□□□□ -0.3
EXTL3-201ENST00000220562 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
EXTL3-201ENST00000220562 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
EXTL3-201ENST00000220562 Q6ZS46 218 aa13.15□□□□□ -0.3
EXTL3-201ENST00000220562 IGLV2-18A0A075B6J9 118 aa13.15□□□□□ -0.3
EXTL3-201ENST00000220562 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.31
EXTL3-201ENST00000220562 CD164L2Q6UWJ8 174 aa13.14□□□□□ -0.31
EXTL3-201ENST00000220562 PPDPFQ9H3Y8 114 aa13.14□□□□□ -0.31
EXTL3-201ENST00000220562 NCOA6Q14686 2063 aaPredicted RBP13.14□□□□□ -0.31
EXTL3-201ENST00000220562 HRCT1Q6UXD1 115 aa13.14□□□□□ -0.31
EXTL3-201ENST00000220562 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
EXTL3-201ENST00000220562 KIAA1549Q9HCM3 1950 aa13.13□□□□□ -0.31
EXTL3-201ENST00000220562 LINC00959A0A1B0GUT2 108 aa13.13□□□□□ -0.31
EXTL3-201ENST00000220562 TIMM17BO60830 172 aa13.13□□□□□ -0.31
EXTL3-201ENST00000220562 M0R2N4 97 aa13.12□□□□□ -0.31
EXTL3-201ENST00000220562 KPRPQ5T749 579 aaPredicted RBP13.12□□□□□ -0.31
EXTL3-201ENST00000220562 LINC01006Q8NI28 216 aa13.12□□□□□ -0.31
EXTL3-201ENST00000220562 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 KLLNB2CW77 178 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 M0R378 163 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 UBE2D1P51668 147 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 GAS8-AS1O95177 125 aa13.11□□□□□ -0.31
EXTL3-201ENST00000220562 RPL37AP8A6NKH3 93 aa13.1□□□□□ -0.31
EXTL3-201ENST00000220562 C2orf91Q6ZV80 131 aa13.1□□□□□ -0.31
EXTL3-201ENST00000220562 SMIM11BQ8TCY0 68 aa13.1□□□□□ -0.31
EXTL3-201ENST00000220562 IGLV1-40P01703 118 aa13.1□□□□□ -0.31
EXTL3-201ENST00000220562 LELP1Q5T871 98 aa13.1□□□□□ -0.31
EXTL3-201ENST00000220562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.31
EXTL3-201ENST00000220562 FREM1Q5H8C1 2179 aa13.09□□□□□ -0.31
EXTL3-201ENST00000220562 DHRS4-AS1Q9P1J3 65 aa13.09□□□□□ -0.31
EXTL3-201ENST00000220562 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.32
EXTL3-201ENST00000220562 Q6ZQY7 126 aa13.08□□□□□ -0.32
EXTL3-201ENST00000220562 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
EXTL3-201ENST00000220562 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
EXTL3-201ENST00000220562 SPINK6Q6UWN8 80 aa13.07□□□□□ -0.32
EXTL3-201ENST00000220562 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
EXTL3-201ENST00000220562 SNURFQ9Y675 71 aa13.07□□□□□ -0.32
EXTL3-201ENST00000220562 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
EXTL3-201ENST00000220562 WFDC13Q8IUB5 93 aa13.06□□□□□ -0.32
EXTL3-201ENST00000220562 NBASA2RRP1 2371 aa13.06□□□□□ -0.32
EXTL3-201ENST00000220562 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 EDN2P20800 178 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 LST1O00453 97 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 POLR2KP53803 58 aaKnown RBP13.05□□□□□ -0.32
EXTL3-201ENST00000220562 ZNF706Q9Y5V0 76 aaPredicted RBP13.05□□□□□ -0.32
EXTL3-201ENST00000220562 TECTAO75443 2155 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 DSCAML1Q8TD84 2053 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
EXTL3-201ENST00000220562 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
EXTL3-201ENST00000220562 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
EXTL3-201ENST00000220562 COX17Q14061 63 aa13.03□□□□□ -0.32
EXTL3-201ENST00000220562 CACNA1HO95180 2353 aa13.03□□□□□ -0.32
EXTL3-201ENST00000220562 IGLV9-49A0A0B4J1Y8 123 aa13.03□□□□□ -0.32
EXTL3-201ENST00000220562 PCNX3Q9H6A9 2034 aa13.03□□□□□ -0.32
EXTL3-201ENST00000220562 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
EXTL3-201ENST00000220562 UBE2D3P61077 147 aa13.02□□□□□ -0.33
EXTL3-201ENST00000220562 UBE2D2P62837 147 aa13.02□□□□□ -0.33
EXTL3-201ENST00000220562 CDSNQ15517 529 aa13.01□□□□□ -0.33
EXTL3-201ENST00000220562 POM121L12Q8N7R1 296 aa13.01□□□□□ -0.33
EXTL3-201ENST00000220562 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
EXTL3-201ENST00000220562 CDC42SE2Q9NRR3 84 aa13.01□□□□□ -0.33
EXTL3-201ENST00000220562 ZNF73O43830 326 aaPredicted RBP13.01□□□□□ -0.33
EXTL3-201ENST00000220562 FAM240AA0A1B0GVK7 77 aa13□□□□□ -0.33
EXTL3-201ENST00000220562 PRR15LQ9BU68 103 aa13□□□□□ -0.33
EXTL3-201ENST00000220562 MED12LQ86YW9 2145 aa13□□□□□ -0.33
EXTL3-201ENST00000220562 FAM30AQ9NZY2 134 aa13□□□□□ -0.33
EXTL3-201ENST00000220562 TANC2Q9HCD6 1990 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 LY6G6CO95867 125 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 Q8IZM0 81 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 MED13LQ71F56 2210 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 A0A0U1RQV1 116 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 SERP2Q8N6R1 65 aa12.99□□□□□ -0.33
EXTL3-201ENST00000220562 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
EXTL3-201ENST00000220562 K7ERS5 55 aa12.97□□□□□ -0.33
EXTL3-201ENST00000220562 FAM19A3Q7Z5A8 133 aa12.97□□□□□ -0.33
EXTL3-201ENST00000220562 CYSRT1A8MQ03 144 aa12.97□□□□□ -0.33
EXTL3-201ENST00000220562 NDUFA7O95182 113 aa12.96□□□□□ -0.33
EXTL3-201ENST00000220562 AVPP01185 164 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms