RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
CLDN11-201ENST00000064724 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-201ENST00000064724 Q6ZTI0 123 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 ZNF418Q8TF45 676 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-201ENST00000064724 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 CSDC2Q9Y534 153 aaKnown RBP12.4□□□□□ -0.42
CLDN11-201ENST00000064724 K7EQD1 137 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
CLDN11-201ENST00000064724 OXLD1Q5BKU9 147 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 DGAT2L7PQ6IED9 249 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
CLDN11-201ENST00000064724 RNF183Q96D59 192 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 SIGMAR1Q99720 223 aa12.4□□□□□ -0.42
CLDN11-201ENST00000064724 A8MZ25 164 aa12.39□□□□□ -0.43
CLDN11-201ENST00000064724 TIMM17BO60830 172 aa12.39□□□□□ -0.43
CLDN11-201ENST00000064724 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
CLDN11-201ENST00000064724 MIAQ16674 131 aa12.39□□□□□ -0.43
CLDN11-201ENST00000064724 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
CLDN11-201ENST00000064724 DAZ4Q86SG3 579 aaKnown RBP12.39□□□□□ -0.43
CLDN11-201ENST00000064724 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
CLDN11-201ENST00000064724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
CLDN11-201ENST00000064724 PRSS2P07478 247 aa12.38□□□□□ -0.43
CLDN11-201ENST00000064724 TEN1Q86WV5 123 aa12.38□□□□□ -0.43
CLDN11-201ENST00000064724 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 M0QXV9 152 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 HERVK_113P63121 156 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 TMEM101Q96IK0 257 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
CLDN11-201ENST00000064724 IGLV5-39A0A0G2JS06 123 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 TRBV30A0A0K0K1B3 111 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 NDUFA1O15239 70 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 COX6A2Q02221 97 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 LINC00242Q5T6M2 205 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 PLAC8L1A1L4L8 177 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 PPDPFLQ8WWR9 84 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
CLDN11-201ENST00000064724 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
CLDN11-201ENST00000064724 NBPF19A0A087WUL8 3843 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 C16orf74Q96GX8 76 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 H7C2G1 150 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 IFITM1P13164 125 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 CARD19Q96LW7 228 aa12.35□□□□□ -0.43
CLDN11-201ENST00000064724 NF1P21359 2839 aa12.34□□□□□ -0.43
CLDN11-201ENST00000064724 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
CLDN11-201ENST00000064724 SMAGPQ0VAQ4 97 aa12.33□□□□□ -0.44
CLDN11-201ENST00000064724 Q1RN00 199 aa12.33□□□□□ -0.44
CLDN11-201ENST00000064724 CSNK1G2-AS1Q8NCQ2 148 aa12.33□□□□□ -0.44
CLDN11-201ENST00000064724 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
CLDN11-201ENST00000064724 WNK1Q9H4A3 2382 aa12.33□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 SLC25A20O43772 301 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 CIDEAO60543 219 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE4Q13068 117 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE5Q13069 117 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 CDC42SE2Q9NRR3 84 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 ATXN8Q156A1 80 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 WFDC10AQ9H1F0 79 aa12.32□□□□□ -0.44
CLDN11-201ENST00000064724 TRIAP1O43715 76 aa12.31□□□□□ -0.44
CLDN11-201ENST00000064724 ANKRD29Q8N6D5 301 aa12.31□□□□□ -0.44
CLDN11-201ENST00000064724 C9JAW5 83 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 TRBV6-4A0A1B0GX49 114 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 SMIM1B2RUZ4 78 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 NDUFA7O95182 113 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 PDZD2O15018 2839 aa12.3□□□□□ -0.44
CLDN11-201ENST00000064724 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
CLDN11-201ENST00000064724 HILS1P60008 231 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
CLDN11-201ENST00000064724 ICOSQ9Y6W8 199 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 CUBNO60494 3623 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 TRAV13-1A0A0B4J241 112 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
CLDN11-201ENST00000064724 F5H768 121 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE7O76087 117 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 Q9H8V8 135 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 H7C423 109 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 NPC2P61916 151 aa12.28□□□□□ -0.44
CLDN11-201ENST00000064724 TENM4Q6N022 2769 aa12.26□□□□□ -0.45
CLDN11-201ENST00000064724 ANK3Q12955 4377 aaKnown RBP12.26□□□□□ -0.45
CLDN11-201ENST00000064724 DAND5Q8N907 189 aa12.26□□□□□ -0.45
CLDN11-201ENST00000064724 ZNF625Q96I27 306 aaPredicted RBP12.26□□□□□ -0.45
CLDN11-201ENST00000064724 COX6CP09669 75 aa12.25□□□□□ -0.45
CLDN11-201ENST00000064724 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
CLDN11-201ENST00000064724 UBE2L6O14933 153 aa12.25□□□□□ -0.45
CLDN11-201ENST00000064724 TRBV10-2A0A0K0K1G8 114 aa12.24□□□□□ -0.45
CLDN11-201ENST00000064724 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
CLDN11-201ENST00000064724 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms