RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DCANP1Q8TF63 244 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 SLC25A20O43772 301 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 CFC1P0CG37 223 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 U3KQK5 164 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 DPH3Q96FX2 82 aa8.89□□□□□ -0.99
CHPF2-201ENST00000035307 CRLF1O75462 422 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 FAM110AQ9BQ89 295 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 A0A096LNT2 108 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 GYPEP15421 78 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 LEPROTO15243 131 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 IGHV3-30-3P0DP02 117 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 C10orf126Q8N4M7 172 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 TMEM86BQ8N661 226 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 GAGE12HA6NDE8 117 aa8.88□□□□□ -0.99
CHPF2-201ENST00000035307 M0QY20 66 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 F8W1H4 67 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 ANAPC13Q9BS18 74 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 CLEC2BQ92478 149 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 CDKN2A-AS1Q9UH64 79 aa8.87□□□□□ -0.99
CHPF2-201ENST00000035307 RBMY1BA6NDE4 496 aaKnown RBP8.86□□□□□ -0.99
CHPF2-201ENST00000035307 RBMY1EA6NEQ0 496 aaKnown RBP8.86□□□□□ -0.99
CHPF2-201ENST00000035307 RBMY1DP0C7P1 496 aaKnown RBP8.86□□□□□ -0.99
CHPF2-201ENST00000035307 RBMY1A1P0DJD3 496 aaKnown RBP8.86□□□□□ -0.99
CHPF2-201ENST00000035307 RBMY1CP0DJD4 496 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 TAL2Q16559 108 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 SS18Q15532 418 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 KRTAP1-3Q8IUG1 177 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 ZNF580Q9UK33 172 aa8.86□□□□□ -0.99
CHPF2-201ENST00000035307 NDUFA7O95182 113 aa8.85□□□□□ -0.99
CHPF2-201ENST00000035307 CR1P17927 2039 aa8.85□□□□□ -0.99
CHPF2-201ENST00000035307 K7EQD1 137 aa8.85□□□□□ -0.99
CHPF2-201ENST00000035307 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
CHPF2-201ENST00000035307 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
CHPF2-201ENST00000035307 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
CHPF2-201ENST00000035307 CRYGDP07320 174 aa8.84□□□□□ -0.99
CHPF2-201ENST00000035307 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
CHPF2-201ENST00000035307 KLLNB2CW77 178 aa8.84□□□□□ -0.99
CHPF2-201ENST00000035307 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
CHPF2-201ENST00000035307 HERVK_113P63121 156 aa8.84□□□□□ -0.99
CHPF2-201ENST00000035307 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
CHPF2-201ENST00000035307 ODF3L2Q3SX64 289 aa8.83□□□□□ -1
CHPF2-201ENST00000035307 OTOGQ6ZRI0 2925 aa8.83□□□□□ -1
CHPF2-201ENST00000035307 TRBV20-1A0A075B6N2 111 aa8.83□□□□□ -1
CHPF2-201ENST00000035307 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
CHPF2-201ENST00000035307 MED14OSP0DP75 135 aa8.82□□□□□ -1
CHPF2-201ENST00000035307 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
CHPF2-201ENST00000035307 UBE2WQ96B02 151 aa8.82□□□□□ -1
CHPF2-201ENST00000035307 SPANXA1Q9NS26 97 aa8.82□□□□□ -1
CHPF2-201ENST00000035307 TMEM89A2RUT3 159 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 CNFNQ9BYD5 112 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 Q9HAA7 133 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 PRSS47A8MTI9 375 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
CHPF2-201ENST00000035307 CFAP126Q5VTH2 177 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 VSIG2Q96IQ7 327 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 NDUFA11Q86Y39 141 aa8.81□□□□□ -1
CHPF2-201ENST00000035307 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 TCL1BO95988 128 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 IGHV3-30P01768 117 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 IGHV3-33P01772 117 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
CHPF2-201ENST00000035307 NFE4Q86UQ8 179 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 Q9UF83 564 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
CHPF2-201ENST00000035307 SLC25A29Q8N8R3 303 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 LAMTOR3Q9UHA4 124 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 A0A0J9YXY3 114 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 TSHBP01222 138 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 INSL3P51460 131 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 C9orf66Q5T8R8 295 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 LGALS9O00182 355 aa8.8□□□□□ -1
CHPF2-201ENST00000035307 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
CHPF2-201ENST00000035307 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
CHPF2-201ENST00000035307 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
CHPF2-201ENST00000035307 IGHV1-58A0A0C4DH39 117 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 TRBV27A0A0K0K1C4 114 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 MIR7-3HGQ8N6C7 128 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 SOCS3O14543 225 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
CHPF2-201ENST00000035307 C16orf74Q96GX8 76 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 TM2D2Q9BX73 214 aa8.78□□□□□ -1
CHPF2-201ENST00000035307 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms