RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
ERCC1-201ENST00000013807 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
ERCC1-201ENST00000013807 MRAP2Q96G30 205 aa9.95□□□□□ -0.82
ERCC1-201ENST00000013807 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
ERCC1-201ENST00000013807 CSDC2Q9Y534 153 aaKnown RBP9.95□□□□□ -0.82
ERCC1-201ENST00000013807 A0A096LNI7 61 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 HIGD1CA8MV81 97 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 CCL25O15444 150 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 STPG4Q8N801 248 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
ERCC1-201ENST00000013807 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
ERCC1-201ENST00000013807 XCL1P47992 114 aa9.93□□□□□ -0.82
ERCC1-201ENST00000013807 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
ERCC1-201ENST00000013807 SS18Q15532 418 aa9.93□□□□□ -0.82
ERCC1-201ENST00000013807 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
ERCC1-201ENST00000013807 SMIM7Q9BQ49 75 aa9.93□□□□□ -0.82
ERCC1-201ENST00000013807 TNXBP22105 4242 aa9.92□□□□□ -0.82
ERCC1-201ENST00000013807 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
ERCC1-201ENST00000013807 TMEM242Q9NWH2 141 aa9.92□□□□□ -0.82
ERCC1-201ENST00000013807 C7orf77A4D0Y5 90 aa9.91□□□□□ -0.82
ERCC1-201ENST00000013807 VCYO14598 125 aa9.91□□□□□ -0.82
ERCC1-201ENST00000013807 PPP1R17O96001 155 aa9.91□□□□□ -0.82
ERCC1-201ENST00000013807 ZNF727A8MUV8 499 aa9.9□□□□□ -0.82
ERCC1-201ENST00000013807 C1orf196B1AJZ1 125 aa9.9□□□□□ -0.82
ERCC1-201ENST00000013807 SRP19P09132 144 aaKnown RBP9.9□□□□□ -0.82
ERCC1-201ENST00000013807 AMN1Q8IY45 258 aa9.9□□□□□ -0.82
ERCC1-201ENST00000013807 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
ERCC1-201ENST00000013807 EIF5A2Q9GZV4 153 aaKnown RBP9.9□□□□□ -0.82
ERCC1-201ENST00000013807 V9GYV3 84 aa9.9□□□□□ -0.82
ERCC1-201ENST00000013807 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
ERCC1-201ENST00000013807 NRACQ8N912 160 aa9.89□□□□□ -0.83
ERCC1-201ENST00000013807 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 CEBPGP53567 150 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 SUMO2P61956 95 aaKnown RBP9.88□□□□□ -0.83
ERCC1-201ENST00000013807 SRSF9Q13242 221 aaKnown RBP eCLIP9.88□□□□□ -0.83
ERCC1-201ENST00000013807 RIGQ13278 110 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 NUP35Q8NFH5 326 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
ERCC1-201ENST00000013807 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
ERCC1-201ENST00000013807 SMAGPQ0VAQ4 97 aa9.87□□□□□ -0.83
ERCC1-201ENST00000013807 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
ERCC1-201ENST00000013807 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
ERCC1-201ENST00000013807 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 CAMPP49913 170 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
ERCC1-201ENST00000013807 TRBV24-1A0A075B6N3 115 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 LINC00862A6NCI5 91 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 PPP1R2P9O14990 202 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
ERCC1-201ENST00000013807 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 Q6ZRP5 223 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
ERCC1-201ENST00000013807 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 COX7A2LO14548 114 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 FCER1GP30273 86 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 FAM104BQ5XKR9 115 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 C20orf78Q9BR46 151 aa9.84□□□□□ -0.83
ERCC1-201ENST00000013807 RPL23P62829 140 aaKnown RBP9.83□□□□□ -0.84
ERCC1-201ENST00000013807 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
ERCC1-201ENST00000013807 A0A1B0GW15 77 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 SMIM27A0A1W2PRY6 76 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 TCAPO15273 167 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 RNF151Q2KHN1 245 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 REG3GQ6UW15 175 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 TMEM18Q96B42 140 aa9.82□□□□□ -0.84
ERCC1-201ENST00000013807 APOMO95445 188 aa9.81□□□□□ -0.84
ERCC1-201ENST00000013807 MALP21145 153 aa9.81□□□□□ -0.84
ERCC1-201ENST00000013807 FAM104AQ969W3 186 aa9.81□□□□□ -0.84
ERCC1-201ENST00000013807 LRP2P98164 4655 aa9.81□□□□□ -0.84
ERCC1-201ENST00000013807 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
ERCC1-201ENST00000013807 F8WDY8 70 aa9.8□□□□□ -0.84
ERCC1-201ENST00000013807 CAMK2N2Q96S95 79 aa9.8□□□□□ -0.84
ERCC1-201ENST00000013807 SMDT1Q9H4I9 107 aa9.8□□□□□ -0.84
ERCC1-201ENST00000013807 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
ERCC1-201ENST00000013807 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
ERCC1-201ENST00000013807 C9JQL5 133 aa9.79□□□□□ -0.84
ERCC1-201ENST00000013807 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
ERCC1-201ENST00000013807 Q6ZUT4 128 aa9.79□□□□□ -0.84
ERCC1-201ENST00000013807 hCG_2014768A0A024R1R8 64 aa9.78□□□□□ -0.84
ERCC1-201ENST00000013807 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
ERCC1-201ENST00000013807 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
ERCC1-201ENST00000013807 GAGE2BQ13066 116 aa9.78□□□□□ -0.84
ERCC1-201ENST00000013807 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
ERCC1-201ENST00000013807 OR10D4PQ8NGN7 298 aa9.78□□□□□ -0.84
ERCC1-201ENST00000013807 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
ERCC1-201ENST00000013807 CKS2P33552 79 aa9.77□□□□□ -0.85
ERCC1-201ENST00000013807 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
ERCC1-201ENST00000013807 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.85
ERCC1-201ENST00000013807 ADIRFQ15847 76 aa9.76□□□□□ -0.85
ERCC1-201ENST00000013807 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
ERCC1-201ENST00000013807 SMIM2Q9BVW6 85 aa9.76□□□□□ -0.85
ERCC1-201ENST00000013807 MRPL35Q9NZE8 188 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms