RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 C10orf105Q8TEF2 133 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 IGHV4-59P01825 116 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 C4orf26Q17RF5 130 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 ADAMTSL4-AS1Q5T5F5 129 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 GAGE2AQ6NT46 116 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 Q9UF83 564 aa7.72□□□□□ -1.17
CX3CL1-201ENST00000006053 FLNBO75369 2602 aaKnown RBP7.71□□□□□ -1.17
CX3CL1-201ENST00000006053 MSMBP08118 114 aa7.71□□□□□ -1.17
CX3CL1-201ENST00000006053 PSMB8P28062 276 aa7.71□□□□□ -1.17
CX3CL1-201ENST00000006053 DUX3Q96PT4 197 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 IGKV2-29A2NJV5 120 aaPredicted RBP7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 H3BMM0 161 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 RBMY1A1P0DJD3 496 aaKnown RBP7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 RBMY1CP0DJD4 496 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 RBMY1FQ15415 496 aaKnown RBP7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 C2orf82Q6UX34 121 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 TRBV10-2A0A0K0K1G8 114 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 DAND5Q8N907 189 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 ICOSQ9Y6W8 199 aa7.7□□□□□ -1.18
CX3CL1-201ENST00000006053 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 IGHV1-58A0A0C4DH39 117 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 CLEC2BQ92478 149 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 LITAFQ99732 161 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 MRPS36P82909 103 aaKnown RBP7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 DEFB112Q30KQ8 113 aa7.69□□□□□ -1.18
CX3CL1-201ENST00000006053 J3QLI3 93 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 UQCRQO14949 82 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 COX6CP09669 75 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 DEFB131AP59861 70 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 TEX15Q9BXT5 2789 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
CX3CL1-201ENST00000006053 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 Q6ZSN1 163 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 PKIGQ9Y2B9 76 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 A0A1B0GX51 115 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 HOXD3P31249 432 aaPredicted RBP7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 VSIG2Q96IQ7 327 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 H7C423 109 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 MIAQ16674 131 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 KIR2DL5BQ8NHK3 375 aa7.67□□□□□ -1.18
CX3CL1-201ENST00000006053 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
CX3CL1-201ENST00000006053 HIVEP2P31629 2446 aa7.66□□□□□ -1.18
CX3CL1-201ENST00000006053 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
CX3CL1-201ENST00000006053 DEFB136Q30KP8 78 aa7.66□□□□□ -1.18
CX3CL1-201ENST00000006053 LINC00467Q9BRT7 94 aa7.66□□□□□ -1.18
CX3CL1-201ENST00000006053 A0A1W2PRX2 142 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 B4DSR2 109 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 UBE2D4Q9Y2X8 147 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 DGAT2L7PQ6IED9 249 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 LINC00526Q96FQ7 95 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
CX3CL1-201ENST00000006053 FN1P02751 2386 aaKnown RBP7.65□□□□□ -1.19
CX3CL1-201ENST00000006053 NF1P21359 2839 aa7.65□□□□□ -1.19
CX3CL1-201ENST00000006053 DSCR8Q96T75 97 aa7.64□□□□□ -1.19
CX3CL1-201ENST00000006053 SLURP1P55000 103 aa7.64□□□□□ -1.19
CX3CL1-201ENST00000006053 TMEM61Q8N0U2 210 aa7.64□□□□□ -1.19
CX3CL1-201ENST00000006053 FLNAP21333 2647 aaKnown RBP7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 C18orf65Q6ZTR6 163 aa7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 MRAPQ8TCY5 172 aa7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 TRACP01848 142 aa7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
CX3CL1-201ENST00000006053 KRTAP10-9P60411 292 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 FBN2P35556 2912 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 H3BT86 120 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 LST1O00453 97 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 RPL35AP18077 110 aaKnown RBP7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 TRBV7-7A0A0K0K1E9 115 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 KHDC1LQ5JSQ8 128 aa7.62□□□□□ -1.19
CX3CL1-201ENST00000006053 IGHV3OR16-12A0A075B7B8 117 aa7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 RNF152Q8N8N0 203 aa7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 Q9H8V8 135 aa7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 COX6A2Q02221 97 aa7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
CX3CL1-201ENST00000006053 COX7CP15954 63 aa7.6□□□□□ -1.19
CX3CL1-201ENST00000006053 ITPR2Q14571 2701 aa7.6□□□□□ -1.19
CX3CL1-201ENST00000006053 DPH3Q96FX2 82 aa7.6□□□□□ -1.19
CX3CL1-201ENST00000006053 TMEM89A2RUT3 159 aa7.6□□□□□ -1.19
CX3CL1-201ENST00000006053 TRAV13-1A0A0B4J241 112 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms