RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C PRP4P20053 465 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C PWP1P21304 576 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C YUR1P26725 428 aa2.17□□□□□ -2.06
BRE1YDL074C GAC1P28006 793 aa2.17□□□□□ -2.06
BRE1YDL074C TPS2P31688 896 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C NDI1P32340 513 aa2.17□□□□□ -2.06
BRE1YDL074C VPH1P32563 840 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C FRE1P32791 686 aa2.17□□□□□ -2.06
BRE1YDL074C BCS1P32839 456 aa2.17□□□□□ -2.06
BRE1YDL074C SEC6P32844 805 aa2.17□□□□□ -2.06
BRE1YDL074C YBL036CP38197 257 aa2.17□□□□□ -2.06
BRE1YDL074C OTU2P38747 307 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C FLC2P39719 783 aa2.17□□□□□ -2.06
BRE1YDL074C SAW1P39735 261 aa2.17□□□□□ -2.06
BRE1YDL074C YER186CP40101 306 aa2.17□□□□□ -2.06
BRE1YDL074C CCT7P42943 550 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C PFD1P46988 109 aa2.17□□□□□ -2.06
BRE1YDL074C TEL2P53038 688 aa2.17□□□□□ -2.06
BRE1YDL074C NNF2P53253 936 aa2.17□□□□□ -2.06
BRE1YDL074C YGR283CP53336 341 aaPredicted RBP2.17□□□□□ -2.06
BRE1YDL074C YPR003CP53394 754 aa2.17□□□□□ -2.06
BRE1YDL074C IST1P53843 298 aaPredicted RBP2.17□□□□□ -2.06
BRE1YDL074C YNL144CP53907 740 aa2.17□□□□□ -2.06
BRE1YDL074C MET14Q02196 202 aa2.17□□□□□ -2.06
BRE1YDL074C RLI1Q03195 608 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C SKY1Q03656 742 aa2.17□□□□□ -2.06
BRE1YDL074C HFD1Q04458 532 aa2.17□□□□□ -2.06
BRE1YDL074C YDR338CQ05497 695 aa2.17□□□□□ -2.06
BRE1YDL074C TDA5Q06417 326 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C CUE5Q08412 411 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C NRT1Q08485 598 aa2.17□□□□□ -2.06
BRE1YDL074C YIG1Q08956 461 aa2.17□□□□□ -2.06
BRE1YDL074C ACM1Q08981 209 aa2.17□□□□□ -2.06
BRE1YDL074C TY1A-BLQ12266 440 aa2.17□□□□□ -2.06
BRE1YDL074C ATG34Q12292 412 aa2.17□□□□□ -2.06
BRE1YDL074C SRF1Q12516 437 aa2.17□□□□□ -2.06
BRE1YDL074C ATG11Q12527 1178 aa2.17□□□□□ -2.06
BRE1YDL074C CTF3Q12748 733 aa2.17□□□□□ -2.06
BRE1YDL074C EFG1Q3E705 233 aaKnown RBP2.17□□□□□ -2.06
BRE1YDL074C YPT6Q99260 215 aa2.17□□□□□ -2.06
BRE1YDL074C IZH4Q99393 312 aa2.17□□□□□ -2.06
BRE1YDL074C SSC1P0CS90 654 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C SSA4P22202 642 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C ARG1P22768 420 aa2.16□□□□□ -2.06
BRE1YDL074C PHO87P25360 923 aa2.16□□□□□ -2.06
BRE1YDL074C HRR25P29295 494 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C SIN4P32259 974 aa2.16□□□□□ -2.06
BRE1YDL074C BIO2P32451 375 aa2.16□□□□□ -2.06
BRE1YDL074C PDB1P32473 366 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C DUR3P33413 735 aa2.16□□□□□ -2.06
BRE1YDL074C STE13P33894 931 aa2.16□□□□□ -2.06
BRE1YDL074C MOT2P34909 587 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C MRPL7P36519 292 aa2.16□□□□□ -2.06
BRE1YDL074C MAK5P38112 773 aaPredicted RBP2.16□□□□□ -2.06
BRE1YDL074C MED8P38304 223 aa2.16□□□□□ -2.06
BRE1YDL074C KSP1P38691 1029 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C AIM18P38884 321 aa2.16□□□□□ -2.06
BRE1YDL074C VAC8P39968 578 aa2.16□□□□□ -2.06
BRE1YDL074C RPT2P40327 437 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C ESL1P40456 1118 aa2.16□□□□□ -2.06
BRE1YDL074C DPH1P40487 425 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C ALA1P40825 983 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C EMW1P42842 904 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C FAR3P46671 204 aa2.16□□□□□ -2.06
BRE1YDL074C TAF1P46677 1066 aa2.16□□□□□ -2.06
BRE1YDL074C ATG36P46983 293 aa2.16□□□□□ -2.06
BRE1YDL074C VTC4P47075 721 aa2.16□□□□□ -2.06
BRE1YDL074C TMA22P47089 198 aaPredicted RBP2.16□□□□□ -2.06
BRE1YDL074C AZR1P50080 613 aa2.16□□□□□ -2.06
BRE1YDL074C LGE1Q02796 332 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C SPO19Q03029 223 aa2.16□□□□□ -2.06
BRE1YDL074C MUB1Q03162 620 aa2.16□□□□□ -2.06
BRE1YDL074C ADE13Q05911 482 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C MAG2Q06436 670 aaKnown RBP2.16□□□□□ -2.06
BRE1YDL074C YDL121CQ07541 149 aa2.16□□□□□ -2.06
BRE1YDL074C GNT1Q12096 491 aa2.16□□□□□ -2.06
BRE1YDL074C EMP46Q12396 444 aa2.16□□□□□ -2.06
BRE1YDL074C KCS1Q12494 1050 aa2.16□□□□□ -2.06
BRE1YDL074C ZPS1Q12512 249 aa2.16□□□□□ -2.06
BRE1YDL074C ENO2P00925 437 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C GAL80P04387 435 aa2.15□□□□□ -2.06
BRE1YDL074C HAP2P06774 265 aa2.15□□□□□ -2.06
BRE1YDL074C RAD3P06839 778 aa2.15□□□□□ -2.06
BRE1YDL074C CHS1P08004 1131 aa2.15□□□□□ -2.06
BRE1YDL074C RPL4AP10664 362 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C EXO70P19658 623 aa2.15□□□□□ -2.06
BRE1YDL074C AMD2P22580 549 aa2.15□□□□□ -2.06
BRE1YDL074C SAT4P25333 603 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C AAD3P25612 363 aa2.15□□□□□ -2.06
BRE1YDL074C MSH2P25847 964 aa2.15□□□□□ -2.06
BRE1YDL074C BUD14P27637 709 aa2.15□□□□□ -2.06
BRE1YDL074C MVD1P32377 396 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C CBF5P33322 483 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
BRE1YDL074C SWH1P35845 1188 aa2.15□□□□□ -2.06
BRE1YDL074C RRP14P36080 434 aaKnown RBP2.15□□□□□ -2.06
BRE1YDL074C HEL1P36113 551 aa2.15□□□□□ -2.06
BRE1YDL074C ETR1P38071 380 aa2.15□□□□□ -2.06
BRE1YDL074C RDH54P38086 958 aa2.15□□□□□ -2.06
BRE1YDL074C FLR1P38124 548 aa2.15□□□□□ -2.06
BRE1YDL074C BIT2P38346 545 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 165 ms