RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SUGT1Q9Y2Z0 365 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 KDM4AO75164 1064 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 BAG3O95817 575 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 EVCP57679 992 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 MFSD6Q6ZSS7 791 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 RTKN2Q8IZC4 609 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 PPP1R1BQ9UD71 204 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-232ENST00000641947 BRPF3Q9ULD4 1205 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 TTF2Q9UNY4 1162 aaKnown RBP20.76■□□□□ 0.91
PHGDH-232ENST00000641947 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
PHGDH-232ENST00000641947 USP17L8P0C7I0 530 aa20.75■□□□□ 0.91
PHGDH-232ENST00000641947 SCRN1Q12765 414 aa20.75■□□□□ 0.91
PHGDH-232ENST00000641947 STRIP1Q5VSL9 837 aa20.75■□□□□ 0.91
PHGDH-232ENST00000641947 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
PHGDH-232ENST00000641947 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-232ENST00000641947 ZSWIM5Q9P217 1185 aa20.75■□□□□ 0.91
PHGDH-232ENST00000641947 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-232ENST00000641947 SH2B2O14492 632 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-232ENST00000641947 PFKFB2O60825 505 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 SCNN1DP51172 638 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
PHGDH-232ENST00000641947 TGFBRAP1Q8WUH2 860 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 GJB2P29033 226 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 PDIA3P30101 505 aaKnown RBP20.74■□□□□ 0.91
PHGDH-232ENST00000641947 GRIPAP1Q4V328 841 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 KLHL34Q8N239 644 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 IGDCC4Q8TDY8 1250 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 NOL10Q9BSC4 688 aaKnown RBP20.74■□□□□ 0.91
PHGDH-232ENST00000641947 CNNM2Q9H8M5 875 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 SMC3Q9UQE7 1217 aa20.74■□□□□ 0.91
PHGDH-232ENST00000641947 FGRP09769 529 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 USP5P45974 858 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 NUCB2P80303 420 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 MAPKAPK5Q8IW41 473 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 KRT23Q9C075 422 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 ARPP21Q9UBL0 812 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-232ENST00000641947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
PHGDH-232ENST00000641947 TCHHQ07283 1943 aa20.73■□□□□ 0.91
PHGDH-232ENST00000641947 USP17L3A6NCW0 530 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 USP17L4A6NCW7 530 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 FKBP1AP62942 108 aaKnown RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 USP17L1Q7RTZ2 530 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 SLF2Q8IX21 1173 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 TEX11Q8IYF3 940 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 ZNF274Q96GC6 653 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 LY9Q9HBG7 655 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 NCOA5Q9HCD5 579 aaKnown RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 PCDHAC2Q9Y5I4 1007 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 JAK2O60674 1132 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 PRDM1O75626 825 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 BRD1O95696 1058 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 RAB11FIP4Q86YS3 637 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 KIAA0825Q8IV33 1275 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 RNF41Q9H4P4 317 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 TOMM22Q9NS69 142 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
PHGDH-232ENST00000641947 FLT1P17948 1338 aa20.72■□□□□ 0.91
PHGDH-232ENST00000641947 SRCAPQ6ZRS2 3230 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 MYH8P13535 1937 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 KLF18A0A0U1RQI7 1052 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 CTDNEP1O95476 244 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 CCT2P78371 535 aaKnown RBP20.71■□□□□ 0.91
PHGDH-232ENST00000641947 C12orf60Q5U649 245 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 ZKSCAN3Q9BRR0 538 aa20.71■□□□□ 0.91
PHGDH-232ENST00000641947 FOXD4L5Q5VV16 416 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-232ENST00000641947 NLGN2Q8NFZ4 835 aa20.7■□□□□ 0.9
PHGDH-232ENST00000641947 FOXD4L4Q8WXT5 416 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-232ENST00000641947 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
PHGDH-232ENST00000641947 SAP30BPQ9UHR5 308 aaKnown RBP20.7■□□□□ 0.9
PHGDH-232ENST00000641947 ROBO3Q96MS0 1386 aa20.7■□□□□ 0.9
PHGDH-232ENST00000641947 SIPA1L1O43166 1804 aa20.7■□□□□ 0.9
PHGDH-232ENST00000641947 SYT1P21579 422 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 APOBEC3HQ6NTF7 200 aaKnown RBP20.69■□□□□ 0.9
PHGDH-232ENST00000641947 HHIPL2Q6UWX4 724 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 CERS3Q8IU89 383 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-232ENST00000641947 PLCG2P16885 1265 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 CRKP46108 304 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 PLCD1P51178 756 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 TMEM67Q5HYA8 995 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 LARGE2Q8N3Y3 721 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 NSUN7Q8NE18 718 aaKnown RBP20.69■□□□□ 0.9
PHGDH-232ENST00000641947 DYNLL2Q96FJ2 89 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
PHGDH-232ENST00000641947 GOLGA8BA8MQT2 603 aa20.68■□□□□ 0.9
PHGDH-232ENST00000641947 NFKBIEO00221 500 aa20.68■□□□□ 0.9
PHGDH-232ENST00000641947 SGMS1Q86VZ5 419 aa20.68■□□□□ 0.9
PHGDH-232ENST00000641947 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
PHGDH-232ENST00000641947 TEKT1Q969V4 418 aa20.68■□□□□ 0.9
PHGDH-232ENST00000641947 DDX4Q9NQI0 724 aaKnown RBP20.68■□□□□ 0.9
PHGDH-232ENST00000641947 IFIT3O14879 490 aaKnown RBP20.67■□□□□ 0.9
PHGDH-232ENST00000641947 ORC4O43929 436 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms