RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 BBOX1O75936 387 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 LIG1P18858 919 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 CDC27P30260 824 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 PGBD1Q96JS3 809 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 PPP1R9BQ96SB3 815 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
CASC19-230ENST00000641421 NID2Q14112 1375 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 UFL1O94874 794 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 USP28Q96RU2 1077 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 CRAMP1Q96RY5 1269 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 ZKSCAN3Q9BRR0 538 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 NUP62CLQ9H1M0 184 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 DDX19AQ9NUU7 478 aaKnown RBP12.42□□□□□ -0.42
CASC19-230ENST00000641421 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
CASC19-230ENST00000641421 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 KLRG2A4D1S0 409 aaPredicted RBP12.41□□□□□ -0.42
CASC19-230ENST00000641421 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 USP17L21D6R901 530 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 PLSCR1O15162 318 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 RCAN1P53805 252 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 GSTO1P78417 241 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
CASC19-230ENST00000641421 NTRK3Q16288 839 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
CASC19-230ENST00000641421 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
CASC19-230ENST00000641421 STK36Q9NRP7 1315 aa12.41□□□□□ -0.42
CASC19-230ENST00000641421 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
CASC19-230ENST00000641421 APBA3O96018 575 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
CASC19-230ENST00000641421 FGRP09769 529 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 RTN1Q16799 776 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 TMC4Q7Z404 712 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 PHKBQ93100 1093 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
CASC19-230ENST00000641421 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
CASC19-230ENST00000641421 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 DACT1Q9NYF0 836 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 RTEL1Q9NZ71 1219 aa12.4□□□□□ -0.42
CASC19-230ENST00000641421 DUOX1Q9NRD9 1551 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 RANBP6O60518 1105 aaKnown RBP12.39□□□□□ -0.43
CASC19-230ENST00000641421 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
CASC19-230ENST00000641421 LDHCP07864 332 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 IFNAR1P17181 557 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
CASC19-230ENST00000641421 TRIM29Q14134 588 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 SEC23AQ15436 765 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 UVSSAQ2YD98 709 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 KRT40Q6A162 431 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 ZNF654Q8IZM8 581 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 WASF1Q92558 559 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
CASC19-230ENST00000641421 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
CASC19-230ENST00000641421 CCDC88AQ3V6T2 1871 aa12.39□□□□□ -0.43
CASC19-230ENST00000641421 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 ORC4O43929 436 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 MYSM1Q5VVJ2 828 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
CASC19-230ENST00000641421 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
CASC19-230ENST00000641421 CD209Q9NNX6 404 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
CASC19-230ENST00000641421 TNKSO95271 1327 aa12.38□□□□□ -0.43
CASC19-230ENST00000641421 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms