RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 ACTL7BQ9Y614 415 aa9.16□□□□□ -0.94
RTTN-217ENST00000640393 TIAF1O95411 115 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 F13A1P00488 732 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 RAB6AP20340 208 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 PPM1JQ5JR12 505 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 DZIP1LQ8IYY4 767 aaKnown RBP9.15□□□□□ -0.94
RTTN-217ENST00000640393 C2CD4AQ8NCU7 369 aaPredicted RBP9.15□□□□□ -0.94
RTTN-217ENST00000640393 FBLIM1Q8WUP2 373 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
RTTN-217ENST00000640393 GAL3ST3Q96A11 431 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 PLPPR2Q96GM1 343 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 SPOCK3Q9BQ16 436 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 TPSG1Q9NRR2 321 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
RTTN-217ENST00000640393 PRAMEF27A3QJZ7 478 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 HCLS1P14317 486 aaPredicted RBP9.14□□□□□ -0.95
RTTN-217ENST00000640393 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
RTTN-217ENST00000640393 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 ARMC10Q8N2F6 343 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 FBXO27Q8NI29 283 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 FAM46AQ96IP4 442 aaKnown RBP9.14□□□□□ -0.95
RTTN-217ENST00000640393 RHOVQ96L33 236 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 PIDD1Q9HB75 910 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 SSU72Q9NP77 194 aaKnown RBP9.14□□□□□ -0.95
RTTN-217ENST00000640393 FAM105AQ9NUU6 356 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 CRIM1Q9NZV1 1036 aa9.14□□□□□ -0.95
RTTN-217ENST00000640393 TTLL4Q14679 1199 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 ZC3H12AQ5D1E8 599 aaKnown RBP9.13□□□□□ -0.95
RTTN-217ENST00000640393 WIPI1Q5MNZ9 446 aaPredicted RBP9.13□□□□□ -0.95
RTTN-217ENST00000640393 Q6ZS46 218 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 SPON2Q9BUD6 331 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 DISC1Q9NRI5 854 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 DDX41Q9UJV9 622 aaKnown RBP9.13□□□□□ -0.95
RTTN-217ENST00000640393 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.13□□□□□ -0.95
RTTN-217ENST00000640393 HIF3AQ9Y2N7 669 aa9.13□□□□□ -0.95
RTTN-217ENST00000640393 BPNT1O95861 308 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 NFKBIBQ15653 356 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 DIEXFQ68CQ4 756 aaKnown RBP9.12□□□□□ -0.95
RTTN-217ENST00000640393 HDXQ7Z353 690 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 PCDHGC5Q9Y5F6 944 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 NFICP08651 508 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 GATAD2BQ8WXI9 593 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
RTTN-217ENST00000640393 ATXN3LQ9H3M9 355 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 UBP1Q9NZI7 540 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 DAGLAQ9Y4D2 1042 aa9.12□□□□□ -0.95
RTTN-217ENST00000640393 SUPT16HQ9Y5B9 1047 aaKnown RBP9.12□□□□□ -0.95
RTTN-217ENST00000640393 DHX15O43143 795 aaKnown RBP9.11□□□□□ -0.95
RTTN-217ENST00000640393 PROCP04070 461 aa9.11□□□□□ -0.95
RTTN-217ENST00000640393 GARTP22102 1010 aa9.11□□□□□ -0.95
RTTN-217ENST00000640393 KIAA0825Q8IV33 1275 aa9.11□□□□□ -0.95
RTTN-217ENST00000640393 ACBD3Q9H3P7 528 aa9.11□□□□□ -0.95
RTTN-217ENST00000640393 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
RTTN-217ENST00000640393 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
RTTN-217ENST00000640393 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.1□□□□□ -0.95
RTTN-217ENST00000640393 BEND4Q6ZU67 534 aa9.1□□□□□ -0.95
RTTN-217ENST00000640393 FAM20CQ8IXL6 584 aa9.1□□□□□ -0.95
RTTN-217ENST00000640393 FAM221AA4D161 298 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 FURINP09958 794 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 MCM4P33991 863 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 TNNI2P48788 182 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 ETF1P62495 437 aaKnown RBP9.09□□□□□ -0.95
RTTN-217ENST00000640393 ERVK-24P63145 666 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 RPL6Q02878 288 aaKnown RBP9.09□□□□□ -0.95
RTTN-217ENST00000640393 SEZ6Q53EL9 994 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 FAM196AQ6ZSG2 479 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 EAF1Q96JC9 268 aaPredicted RBP9.09□□□□□ -0.95
RTTN-217ENST00000640393 CCSER2Q9H7U1 834 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 SNCAIPQ9Y6H5 919 aa9.09□□□□□ -0.95
RTTN-217ENST00000640393 FAM95CA0A1B0GW59 222 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 HMX2A2RU54 273 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 GREM1O60565 184 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 CILPO75339 1184 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 CRKP46108 304 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 UVSSAQ2YD98 709 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 CDC37L1Q7L3B6 337 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 SMYD4Q8IYR2 804 aaPredicted RBP9.08□□□□□ -0.96
RTTN-217ENST00000640393 YIPF2Q9BWQ6 316 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 RAXQ9Y2V3 346 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 CORINQ9Y5Q5 1042 aa9.08□□□□□ -0.96
RTTN-217ENST00000640393 SYNGAP1Q96PV0 1343 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 GFRA2O00451 464 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 NEFMP07197 916 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 GRK4P32298 578 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 APOBRQ0VD83 1088 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 PAK2Q13177 524 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 PRR23CQ6ZRP0 262 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 CYFIP1Q7L576 1253 aa9.07□□□□□ -0.96
RTTN-217ENST00000640393 CCDC84Q86UT8 332 aaPredicted RBP9.07□□□□□ -0.96
RTTN-217ENST00000640393 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms