RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
HLA-C-210ENST00000640219 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
HLA-C-210ENST00000640219 FAM151AQ8WW52 585 aa17.21■□□□□ 0.35
HLA-C-210ENST00000640219 COA7Q96BR5 231 aa17.21■□□□□ 0.35
HLA-C-210ENST00000640219 GUCD1Q96NT3 240 aa17.21■□□□□ 0.35
HLA-C-210ENST00000640219 C11orf49Q9H6J7 331 aa17.21■□□□□ 0.35
HLA-C-210ENST00000640219 FAM109BQ6ICB4 259 aaPredicted RBP17.2■□□□□ 0.34
HLA-C-210ENST00000640219 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
HLA-C-210ENST00000640219 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
HLA-C-210ENST00000640219 SSH1Q8WYL5 1049 aa17.2■□□□□ 0.34
HLA-C-210ENST00000640219 MAST3O60307 1309 aa17.2■□□□□ 0.34
HLA-C-210ENST00000640219 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
HLA-C-210ENST00000640219 TCP10Q12799 353 aa17.19■□□□□ 0.34
HLA-C-210ENST00000640219 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
HLA-C-210ENST00000640219 GADL1Q6ZQY3 521 aa17.19■□□□□ 0.34
HLA-C-210ENST00000640219 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
HLA-C-210ENST00000640219 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
HLA-C-210ENST00000640219 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
HLA-C-210ENST00000640219 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
HLA-C-210ENST00000640219 HHIPL2Q6UWX4 724 aa17.18■□□□□ 0.34
HLA-C-210ENST00000640219 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
HLA-C-210ENST00000640219 SLC45A1Q9Y2W3 748 aa17.18■□□□□ 0.34
HLA-C-210ENST00000640219 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
HLA-C-210ENST00000640219 HMGCRP04035 888 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
HLA-C-210ENST00000640219 PUS3Q9BZE2 481 aaKnown RBP17.17■□□□□ 0.34
HLA-C-210ENST00000640219 HMX1Q9NP08 348 aaPredicted RBP17.17■□□□□ 0.34
HLA-C-210ENST00000640219 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 VCANP13611 3396 aa17.17■□□□□ 0.34
HLA-C-210ENST00000640219 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
HLA-C-210ENST00000640219 PICK1Q9NRD5 415 aa17.16■□□□□ 0.34
HLA-C-210ENST00000640219 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
HLA-C-210ENST00000640219 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
HLA-C-210ENST00000640219 SCYL3Q8IZE3 742 aa17.15■□□□□ 0.34
HLA-C-210ENST00000640219 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
HLA-C-210ENST00000640219 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
HLA-C-210ENST00000640219 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
HLA-C-210ENST00000640219 PTPRAP18433 802 aa17.14■□□□□ 0.33
HLA-C-210ENST00000640219 TRIM32Q13049 653 aa17.14■□□□□ 0.33
HLA-C-210ENST00000640219 CDC42EP5Q6NZY7 148 aa17.14■□□□□ 0.33
HLA-C-210ENST00000640219 PFASO15067 1338 aa17.14■□□□□ 0.33
HLA-C-210ENST00000640219 MROH5Q6ZUA9 1318 aa17.14■□□□□ 0.33
HLA-C-210ENST00000640219 PHF20L1A8MW92 1017 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 NFIAQ12857 509 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 ZNF697Q5TEC3 545 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
HLA-C-210ENST00000640219 GRM8O00222 908 aa17.12■□□□□ 0.33
HLA-C-210ENST00000640219 FAM198AQ9UFP1 575 aa17.12■□□□□ 0.33
HLA-C-210ENST00000640219 SPTBN5Q9NRC6 3674 aaKnown RBP17.11■□□□□ 0.33
HLA-C-210ENST00000640219 DOCK3Q8IZD9 2030 aa17.11■□□□□ 0.33
HLA-C-210ENST00000640219 COL9A1P20849 921 aa17.11■□□□□ 0.33
HLA-C-210ENST00000640219 MAFAQ8NHW3 353 aaPredicted RBP17.11■□□□□ 0.33
HLA-C-210ENST00000640219 AGTPBP1Q9UPW5 1226 aa17.11■□□□□ 0.33
HLA-C-210ENST00000640219 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
HLA-C-210ENST00000640219 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
HLA-C-210ENST00000640219 COL2A1P02458 1487 aaPredicted RBP17.11■□□□□ 0.33
HLA-C-210ENST00000640219 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
HLA-C-210ENST00000640219 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
HLA-C-210ENST00000640219 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
HLA-C-210ENST00000640219 GJD2Q9UKL4 321 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
HLA-C-210ENST00000640219 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
HLA-C-210ENST00000640219 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
HLA-C-210ENST00000640219 COL6A1P12109 1028 aa17.09■□□□□ 0.33
HLA-C-210ENST00000640219 LRRC26Q2I0M4 334 aa17.09■□□□□ 0.33
HLA-C-210ENST00000640219 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
HLA-C-210ENST00000640219 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
HLA-C-210ENST00000640219 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
HLA-C-210ENST00000640219 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
HLA-C-210ENST00000640219 ATRNL1Q5VV63 1379 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 PDE8BO95263 885 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 GCLCP48506 637 aaPredicted RBP17.08■□□□□ 0.32
HLA-C-210ENST00000640219 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 TREML2Q5T2D2 321 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 TRIB2Q92519 343 aa17.08■□□□□ 0.32
HLA-C-210ENST00000640219 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
HLA-C-210ENST00000640219 LAMA2P24043 3122 aaKnown RBP17.08■□□□□ 0.32
HLA-C-210ENST00000640219 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
HLA-C-210ENST00000640219 RARSP54136 660 aaKnown RBP17.07■□□□□ 0.32
HLA-C-210ENST00000640219 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
HLA-C-210ENST00000640219 KAZALD1Q96I82 304 aa17.07■□□□□ 0.32
HLA-C-210ENST00000640219 CTNND1O60716 968 aaKnown RBP17.06■□□□□ 0.32
HLA-C-210ENST00000640219 BCAR3O75815 825 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 CYP2B6P20813 491 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
HLA-C-210ENST00000640219 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
HLA-C-210ENST00000640219 VGLL2Q8N8G2 317 aa17.06■□□□□ 0.32
HLA-C-210ENST00000640219 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms