RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGSF3O75054 1194 aa26.44■■□□□ 1.82
SCN1B-206ENST00000638536 BAG3O95817 575 aa26.44■■□□□ 1.82
SCN1B-206ENST00000638536 MAP4K4O95819 1239 aaPredicted RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 HSPA1AP0DMV8 641 aaKnown RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 HSPA1BP0DMV9 641 aaKnown RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 IREB2P48200 963 aaKnown RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 MKRN3Q13064 507 aaKnown RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.44■■□□□ 1.82
SCN1B-206ENST00000638536 LNPKQ9C0E8 428 aa26.44■■□□□ 1.82
SCN1B-206ENST00000638536 ZNF532Q9HCE3 1301 aa26.44■■□□□ 1.82
SCN1B-206ENST00000638536 ATRNL1Q5VV63 1379 aa26.44■■□□□ 1.82
SCN1B-206ENST00000638536 MAP2K2P36507 400 aa26.43■■□□□ 1.82
SCN1B-206ENST00000638536 KIF23Q02241 960 aaPredicted RBP26.43■■□□□ 1.82
SCN1B-206ENST00000638536 NOGQ13253 232 aa26.43■■□□□ 1.82
SCN1B-206ENST00000638536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.43■■□□□ 1.82
SCN1B-206ENST00000638536 TGFBRAP1Q8WUH2 860 aa26.43■■□□□ 1.82
SCN1B-206ENST00000638536 WBP1LQ9NX94 342 aa26.43■■□□□ 1.82
SCN1B-206ENST00000638536 NOL10Q9BSC4 688 aaKnown RBP26.43■■□□□ 1.82
SCN1B-206ENST00000638536 MX1P20591 662 aa26.42■■□□□ 1.82
SCN1B-206ENST00000638536 MAPKAPK5Q8IW41 473 aa26.42■■□□□ 1.82
SCN1B-206ENST00000638536 ZSCAN29Q8IWY8 852 aaPredicted RBP26.42■■□□□ 1.82
SCN1B-206ENST00000638536 GPATCH3Q96I76 525 aa26.42■■□□□ 1.82
SCN1B-206ENST00000638536 CSRNP1Q96S65 589 aa26.42■■□□□ 1.82
SCN1B-206ENST00000638536 RIOK1Q9BRS2 568 aaKnown RBP26.42■■□□□ 1.82
SCN1B-206ENST00000638536 TTC41PQ6P2S7 1318 aa26.42■■□□□ 1.82
SCN1B-206ENST00000638536 SIPA1L1O43166 1804 aa26.41■■□□□ 1.82
SCN1B-206ENST00000638536 NPM3O75607 178 aaKnown RBP26.41■■□□□ 1.82
SCN1B-206ENST00000638536 ADD2P35612 726 aa26.41■■□□□ 1.82
SCN1B-206ENST00000638536 ANKRD13AQ8IZ07 590 aa26.41■■□□□ 1.82
SCN1B-206ENST00000638536 SLC10A4Q96EP9 437 aa26.41■■□□□ 1.82
SCN1B-206ENST00000638536 OSBPL5Q9H0X9 879 aaPredicted RBP26.41■■□□□ 1.82
SCN1B-206ENST00000638536 MYH1P12882 1939 aa26.41■■□□□ 1.82
SCN1B-206ENST00000638536 MAP3K9P80192 1104 aa26.4■■□□□ 1.82
SCN1B-206ENST00000638536 VGLL4Q14135 290 aa26.4■■□□□ 1.82
SCN1B-206ENST00000638536 CNKSR2Q8WXI2 1034 aa26.4■■□□□ 1.82
SCN1B-206ENST00000638536 ZKSCAN4Q969J2 545 aaPredicted RBP26.4■■□□□ 1.82
SCN1B-206ENST00000638536 GJA5P36382 358 aa26.39■■□□□ 1.82
SCN1B-206ENST00000638536 WRNIP1Q96S55 665 aa26.39■■□□□ 1.82
SCN1B-206ENST00000638536 ELP3Q9H9T3 547 aa26.39■■□□□ 1.82
SCN1B-206ENST00000638536 ZBTB47Q9UFB7 747 aaPredicted RBP26.39■■□□□ 1.82
SCN1B-206ENST00000638536 FLT1P17948 1338 aa26.39■■□□□ 1.81
SCN1B-206ENST00000638536 PLCG2P16885 1265 aa26.39■■□□□ 1.81
SCN1B-206ENST00000638536 INPP5BP32019 993 aa26.39■■□□□ 1.81
SCN1B-206ENST00000638536 NUCB1Q02818 461 aa26.39■■□□□ 1.81
SCN1B-206ENST00000638536 SPRYD7Q5W111 196 aa26.39■■□□□ 1.81
SCN1B-206ENST00000638536 FAM196BA6NMK8 535 aa26.38■■□□□ 1.81
SCN1B-206ENST00000638536 FOXN1O15353 648 aa26.38■■□□□ 1.81
SCN1B-206ENST00000638536 PDE1AP54750 535 aa26.38■■□□□ 1.81
SCN1B-206ENST00000638536 MAP2K1Q02750 393 aaPredicted RBP26.38■■□□□ 1.81
SCN1B-206ENST00000638536 CHD1LQ86WJ1 897 aa26.38■■□□□ 1.81
SCN1B-206ENST00000638536 ZNF341Q9BYN7 854 aa26.38■■□□□ 1.81
SCN1B-206ENST00000638536 DCAF15Q66K64 600 aa26.37■■□□□ 1.81
SCN1B-206ENST00000638536 WNK4Q96J92 1243 aa26.37■■□□□ 1.81
SCN1B-206ENST00000638536 STAP2Q9UGK3 403 aa26.37■■□□□ 1.81
SCN1B-206ENST00000638536 ZNF112Q9UJU3 913 aa26.37■■□□□ 1.81
SCN1B-206ENST00000638536 MAGEB6P1A0A0J9YX57 407 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 GLRX3O76003 335 aaKnown RBP26.36■■□□□ 1.81
SCN1B-206ENST00000638536 MAP3K10Q02779 954 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 SLC4A8Q2Y0W8 1093 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 TMED8Q6PL24 325 aaPredicted RBP26.36■■□□□ 1.81
SCN1B-206ENST00000638536 LCORLQ8N3X6 602 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 KBTBD3Q8NAB2 608 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 HOOK2Q96ED9 719 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 SAP30BPQ9UHR5 308 aaKnown RBP26.36■■□□□ 1.81
SCN1B-206ENST00000638536 PALD1Q9ULE6 856 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 SNCAIPQ9Y6H5 919 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 UNCXA6NJT0 531 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 PHF20L1A8MW92 1017 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 ERC2O15083 957 aa26.36■■□□□ 1.81
SCN1B-206ENST00000638536 COL2A1P02458 1487 aaPredicted RBP26.35■■□□□ 1.81
SCN1B-206ENST00000638536 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.35■■□□□ 1.81
SCN1B-206ENST00000638536 ARMT1Q9H993 441 aa26.35■■□□□ 1.81
SCN1B-206ENST00000638536 TSKSQ9UJT2 592 aa26.35■■□□□ 1.81
SCN1B-206ENST00000638536 UBE3CQ15386 1083 aa26.34■■□□□ 1.81
SCN1B-206ENST00000638536 OPTNQ96CV9 577 aa26.34■■□□□ 1.81
SCN1B-206ENST00000638536 PUS7LQ9H0K6 701 aaKnown RBP26.34■■□□□ 1.81
SCN1B-206ENST00000638536 LAMB1P07942 1786 aa26.34■■□□□ 1.81
SCN1B-206ENST00000638536 BAZ2AQ9UIF9 1905 aaKnown RBP26.33■■□□□ 1.81
SCN1B-206ENST00000638536 CSADQ9Y600 493 aa26.33■■□□□ 1.81
SCN1B-206ENST00000638536 PRKAB2O43741 272 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 USP5P45974 858 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 PLEKHM2Q8IWE5 1019 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 SDR42E1Q8WUS8 393 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 NAV1Q8NEY1 1877 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 MBD4O95243 580 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 EVX2Q03828 476 aa26.32■■□□□ 1.8
SCN1B-206ENST00000638536 RRP1BQ14684 758 aaKnown RBP26.32■■□□□ 1.8
SCN1B-206ENST00000638536 DDX60LQ5H9U9 1706 aaKnown RBP26.31■■□□□ 1.8
SCN1B-206ENST00000638536 OSBP2Q969R2 916 aa26.31■■□□□ 1.8
SCN1B-206ENST00000638536 OTUD5Q96G74 571 aa26.31■■□□□ 1.8
SCN1B-206ENST00000638536 DNAJC18Q9H819 358 aa26.31■■□□□ 1.8
SCN1B-206ENST00000638536 TBC1D12O60347 775 aa26.3■■□□□ 1.8
SCN1B-206ENST00000638536 ZBTB48P10074 688 aaPredicted RBP26.3■■□□□ 1.8
SCN1B-206ENST00000638536 CERS3Q8IU89 383 aa26.3■■□□□ 1.8
SCN1B-206ENST00000638536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.3■■□□□ 1.8
SCN1B-206ENST00000638536 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.3■■□□□ 1.8
SCN1B-206ENST00000638536 PDE4AP27815 886 aa26.29■■□□□ 1.8
SCN1B-206ENST00000638536 ZSCAN25Q6NSZ9 544 aa26.29■■□□□ 1.8
SCN1B-206ENST00000638536 AIDAQ96BJ3 306 aa26.29■■□□□ 1.8
SCN1B-206ENST00000638536 DHX36Q9H2U1 1008 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms