RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ARPP19P56211 112 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 ZNF654Q8IZM8 581 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 KCTD17Q8N5Z5 321 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 RTL1A6NKG5 1358 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 NCAPH2Q6IBW4 605 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 STX10O60499 249 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 ATP2A2P16615 1042 aaKnown RBP19■□□□□ 0.63
CACNA1A-253ENST00000637927 CCDC77Q9BR77 488 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19■□□□□ 0.63
CACNA1A-253ENST00000637927 MX2P20592 715 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
CACNA1A-253ENST00000637927 GOLGA6L9A6NEM1 432 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 FAM180AQ6UWF9 173 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 RABGAP1Q9Y3P9 1069 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 HMG20BQ9P0W2 317 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 IVNS1ABPQ9Y6Y0 642 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 INTS8Q75QN2 995 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 UTP14CQ5TAP6 766 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 SUFUQ9UMX1 484 aa18.99■□□□□ 0.63
CACNA1A-253ENST00000637927 SYT1P21579 422 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 CDR2Q01850 454 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SETDB1Q15047 1291 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 HINFPQ9BQA5 517 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 DACT1Q9NYF0 836 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 FIS1Q9Y3D6 152 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 HMGB2P26583 209 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SLC8A3P57103 927 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 TRAPPC10P48553 1259 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 NUCB1Q02818 461 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 MTHFSDQ2M296 383 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 NAP1L4Q99733 375 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 VWA3AA6NCI4 1184 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 USP37Q86T82 979 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 ST7Q9NRC1 585 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 STK38LQ9Y2H1 464 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 CYLC1P35663 651 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SEL1L2Q5TEA6 688 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SMYD2Q9NRG4 433 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
CACNA1A-253ENST00000637927 SCYL1Q96KG9 808 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 TOM1O60784 492 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 UFL1O94874 794 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 MOSPD1Q9UJG1 213 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 ZNF594Q96JF6 807 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CTAGE15A4D2H0 777 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CTAGE8P0CG41 777 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 STRN3Q13033 797 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CTAGE6Q86UF2 777 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CTAGE4Q8IX94 777 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 ESYT1Q9BSJ8 1104 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CTAGE9A4FU28 777 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 ANKRD35Q8N283 1001 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 RILPQ96NA2 401 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 PRPF6O94906 941 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 CADPS2Q86UW7 1296 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
CACNA1A-253ENST00000637927 SEPT8Q92599 483 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 NDUFB9Q9Y6M9 179 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 GADL1Q6ZQY3 521 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 CDC26Q8NHZ8 85 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 GANCQ8TET4 914 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 ZSCAN16Q9H4T2 348 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 hCG_1642624A0A1W2PR95 340 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 TAF5LO75529 589 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 INPP5FQ9Y2H2 1132 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 IL2RBP14784 551 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 BLVRAP53004 296 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 KRT79Q5XKE5 535 aa18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 PSPC1Q8WXF1 523 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-253ENST00000637927 M0QZ92 97 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 CLUL1Q15846 466 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 CCDC186Q7Z3E2 898 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 MYLK4Q86YV6 388 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 C10orf67Q8IYJ2 551 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 NOC2LQ9Y3T9 749 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 SKILP12757 684 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 PDE1AP54750 535 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 PLCB4Q15147 1175 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 PSMA7O14818 248 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 INPP1P49441 399 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 SMCR8Q8TEV9 937 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 NSMCE1Q8WV22 266 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 MBD4O95243 580 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 CAPN2P17655 700 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 IFNLR1Q8IU57 520 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-253ENST00000637927 TACC1O75410 805 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms