RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 NLRP2Q9NX02 1062 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 CETN3O15182 167 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 SERPINC1P01008 464 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FAM200BP0CF97 657 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 HARSP12081 509 aaKnown RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 POSTNQ15063 836 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 TRIM68Q6AZZ1 485 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 GRAMD4Q6IC98 578 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 SAPCD2Q86UD0 394 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 NR1H4Q96RI1 486 aaPredicted RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD2-221ENST00000635856 C15orf41Q9Y2V0 281 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 ARHGAP5Q13017 1502 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 NPHP3Q7Z494 1330 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 P4HA2O15460 535 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ARPC4P59998 168 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 MRPS35P82673 323 aaKnown RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 IMMTQ16891 758 aaKnown RBP6.85□□□□□ -1.31
CHD2-221ENST00000635856 TSNAXIP1Q2TAA8 658 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FAAH2Q6GMR7 532 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 PEX5LQ8IYB4 626 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ZNF280CQ8ND82 737 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ATP6V0A1Q93050 837 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 FUCA2Q9BTY2 467 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 ATXN10Q9UBB4 475 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 L1RE1Q9UN81 338 aa6.85□□□□□ -1.31
CHD2-221ENST00000635856 CAPN15O75808 1086 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 SMNDC1O75940 238 aaKnown RBP eCLIP6.84□□□□□ -1.312e-6■■□□□ 12.7
CHD2-221ENST00000635856 LACTBP83111 547 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 DNM1Q05193 864 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 E4F1Q66K89 784 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 NUGGCQ68CJ6 796 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 CDC37L1Q7L3B6 337 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 RPAP2Q8IXW5 612 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 CAGE1Q8TC20 777 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 ARHGAP45Q92619 1136 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 USP6NLQ92738 828 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 FBXW7Q969H0 707 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ABTB1Q969K4 478 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 CLIC6Q96NY7 704 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ZNF521Q96K83 1311 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 CTAGE9A4FU28 777 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 TMEM232C9JQI7 657 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 TOP1P11387 765 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 VDRP11473 427 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ALOX15P16050 662 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 ATP11AP98196 1134 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 CBX3Q13185 183 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 HIBCHQ6NVY1 386 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 RASEFQ8IZ41 740 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHD2-221ENST00000635856 SEC62Q99442 399 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 NRDE2Q9H7Z3 1164 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ZWILCHQ9H900 591 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 NOD2Q9HC29 1040 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 LUC7L2Q9Y383 392 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 CTDP1Q9Y5B0 961 aaPredicted RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 TIAM1Q13009 1591 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ANP32DO95626 131 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 SLC4A2P04920 1241 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ALDH1B1P30837 517 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 LONRF3Q496Y0 759 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 SOGA3Q5TF21 947 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 RASIP1Q5U651 963 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ATF7IPQ6VMQ6 1270 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 BICDL1Q6ZP65 573 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 SLF2Q8IX21 1173 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 ANKS4BQ8N8V4 417 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHD2-221ENST00000635856 CLSTN2Q9H4D0 955 aa6.84□□□□□ -1.31
CHD2-221ENST00000635856 BZW2Q9Y6E2 419 aaKnown RBP6.84□□□□□ -1.31
CHD2-221ENST00000635856 ARHGAP6O43182 974 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 SH3BP5O60239 455 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 MBD4O95243 580 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 CHMLP26374 656 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 GKAP1Q5VSY0 366 aaPredicted RBP6.84□□□□□ -1.32
CHD2-221ENST00000635856 ARHGAP18Q8N392 663 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 CCDC63Q8NA47 563 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 ERMNQ8TAM6 284 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 P3H4Q92791 437 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 IL17RAQ96F46 866 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 SDF4Q9BRK5 362 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 HAUS2Q9NVX0 235 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.32
CHD2-221ENST00000635856 TMCO1Q9UM00 188 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 TMEM98Q9Y2Y6 226 aa6.84□□□□□ -1.32
CHD2-221ENST00000635856 CDHR2Q9BYE9 1310 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms