RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 IQCDQ96DY2 449 aa5.23□□□□□ -1.57
SCN1A-210ENST00000635776 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
SCN1A-210ENST00000635776 MARCH6O60337 910 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 FMNL1O95466 1100 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 NOLC1Q14978 699 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 SEC62Q99442 399 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LTN1O94822 1766 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 GNA11P29992 359 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 PHKA1P46020 1223 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ORC2Q13416 577 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 SUSD4Q5VX71 490 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LINC00301Q8NCQ3 95 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LARP6Q9BRS8 491 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 STK24Q9Y6E0 443 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 BBOX1O75936 387 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 CAMTA2O94983 1202 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LARGE1O95461 756 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 MYL1P05976 194 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 MCAMP43121 646 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 NLRP5P59047 1200 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 FANCBQ8NB91 859 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 BPIFA3Q9BQP9 254 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 JAK2O60674 1132 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 POLR3DP05423 398 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 FGFR2P21802 821 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 DGKHQ86XP1 1220 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF579Q8NAF0 562 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LRRC2Q9BYS8 371 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 TRPM3Q9HCF6 1732 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 FGFR1OPO95684 399 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 MYL5Q02045 173 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 DIS3L2Q8IYB7 885 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 TRPC5Q9UL62 973 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 XDHP47989 1333 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 HLA-DOAP06340 250 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 PIP4K2BP78356 416 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 KIF23Q02241 960 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 NOSTRINQ8IVI9 506 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ACSBG1Q96GR2 724 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 SRRTQ9BXP5 876 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ALS2Q96Q42 1657 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 B4E1Z4 1266 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 USP28Q96RU2 1077 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 MAP3K14Q99558 947 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ARMT1Q9H993 441 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 BMP2KQ9NSY1 1161 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 KIAA1468Q9P260 1216 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 M0R2C6 588 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 LAD1O00515 517 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 GNPATO15228 680 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 NLRP12P59046 1061 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 HLFQ16534 295 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 TMEM266Q2M3C6 531 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 BICDL1Q6ZP65 573 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 PPFIBP1Q86W92 1011 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 IQUBQ8NA54 791 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 PUS7LQ9H0K6 701 aaKnown RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 RRAGDQ9NQL2 400 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ANAPC4Q9UJX5 808 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ATRNO75882 1429 aa5.22□□□□□ -1.57
SCN1A-210ENST00000635776 ADORA1P30542 326 aa5.21□□□□□ -1.57
SCN1A-210ENST00000635776 TCP11L1Q9NUJ3 509 aa5.21□□□□□ -1.57
SCN1A-210ENST00000635776 SLC27A3Q5K4L6 730 aa5.21□□□□□ -1.57
SCN1A-210ENST00000635776 KIF18AQ8NI77 898 aa5.21□□□□□ -1.57
SCN1A-210ENST00000635776 ZSCAN10Q96SZ4 725 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-210ENST00000635776 C6orf50Q9HD87 102 aa5.21□□□□□ -1.57
SCN1A-210ENST00000635776 MAGEC2Q9UBF1 373 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-210ENST00000635776 PTPN14Q15678 1187 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 RBM43Q6ZSC3 357 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 FAM114A1Q8IWE2 563 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF654Q8IZM8 581 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 GPS2Q13227 327 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 RASGRF1Q13972 1273 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 FCHSD1Q86WN1 690 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 PIH1D3Q9NQM4 214 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 PRPF3O43395 683 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF75DP51815 510 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 FOSBP53539 338 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 DNAJC25Q9H1X3 360 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 IL25Q9H293 177 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 KCNH3Q9ULD8 1083 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 MORC2Q9Y6X9 1032 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 LRP6O75581 1613 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 DISP2A7MBM2 1401 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 NTSR2O95665 410 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 PLCD1P51178 756 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 HELBQ8NG08 1087 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 LUC7LQ9NQ29 371 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ZNHIT6Q9NWK9 470 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 USP21Q9UK80 565 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 SUGT1Q9Y2Z0 365 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF804BA4D1E1 1349 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TSPY3P0CV98 308 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TSPY8P0CW00 308 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 GUCY1B3Q02153 619 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 SBK1Q52WX2 424 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TEX2Q8IWB9 1127 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms