RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 IFT20Q8IY31 132 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 C8orf58Q8NAV2 365 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ACEP12821 1306 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 TRIM31Q9BZY9 425 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 INPP5BP32019 993 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 CNNM4Q6P4Q7 775 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ACSBG1Q96GR2 724 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 PPP1R12CQ9BZL4 782 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 TRIM14Q14142 442 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 SV2BQ7L1I2 683 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ARHGEF2Q92974 986 aaKnown RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 INTS4Q96HW7 963 aaKnown RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 STK10O94804 968 aaKnown RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 CEP85Q6P2H3 762 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 LMNTD2Q8IXW0 634 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 NIP7Q9Y221 180 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 GRM1Q13255 1194 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 FBXO31Q5XUX0 539 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 CPA1P15085 419 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ZMYM4Q5VZL5 1548 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 ANKRD12Q6UB98 2062 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 VWA3BQ502W6 1294 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 PLEKHM2Q8IWE5 1019 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 CEP120Q8N960 986 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 SYCP2Q9BX26 1530 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 FAM204AQ9H8W3 233 aa10.18□□□□□ -0.78
CSMD1-218ENST00000635120 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-218ENST00000635120 POLR2DO15514 142 aaKnown RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 DUOX2Q9NRD8 1548 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 MAPK8IP1Q9UQF2 711 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 LDHBP07195 334 aaKnown RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 PSMD6Q15008 389 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ASIC2Q16515 512 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 POTEDQ86YR6 584 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 MAP3K5Q99683 1374 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 SMTNP53814 917 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 USP26Q9BXU7 913 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 KCNH3Q9ULD8 1083 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 CASQ2O14958 399 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 CETN3O15182 167 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ECM2O94769 699 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 FEZ2Q9UHY8 353 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-218ENST00000635120 TBC1D8BQ0IIM8 1120 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 LETM2Q2VYF4 491 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 VPS16Q9H269 839 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 FAM114A2Q9NRY5 505 aa10.17□□□□□ -0.78
CSMD1-218ENST00000635120 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 ERCC3P19447 782 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 CHMLP26374 656 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 DENND2CQ68D51 928 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 SDCCAG8Q86SQ7 713 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 SAP30BPQ9UHR5 308 aaKnown RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 PPP2R5DQ14738 602 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 HELBQ8NG08 1087 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 NLRP3Q96P20 1036 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 ZNF75DP51815 510 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 IDI1Q13907 227 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 ANO1Q5XXA6 986 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 AFAP1L2Q8N4X5 818 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 GABPAQ06546 454 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 PSMB7Q99436 277 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 ASIC3Q9UHC3 531 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 TTF2Q9UNY4 1162 aaKnown RBP10.16□□□□□ -0.78
CSMD1-218ENST00000635120 TNFAIP3P21580 790 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 RILPL1Q5EBL4 403 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 GPCPD1Q9NPB8 672 aa10.16□□□□□ -0.78
CSMD1-218ENST00000635120 PLCD1P51178 756 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 CWF19L2Q2TBE0 894 aaKnown RBP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 TMCO4Q5TGY1 634 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 SATB1Q01826 763 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 FNBP1Q96RU3 617 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 TAOK1Q7L7X3 1001 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 GIGYF1O75420 1035 aaPredicted RBP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 CALUO43852 315 aaPredicted RBP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 NYXQ9GZU5 481 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 NCOA5Q9HCD5 579 aaKnown RBP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 LAMC3Q9Y6N6 1575 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 CCDC169A6NNP5 214 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 FANCCQ00597 558 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 ZNF365Q70YC5 407 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 GCC2Q8IWJ2 1684 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 RBSNQ9H1K0 784 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 VCXQ9H320 206 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 MBD4O95243 580 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 RLBP1P12271 317 aa10.15□□□□□ -0.78
CSMD1-218ENST00000635120 SF3A3Q12874 501 aaKnown RBP eCLIP10.15□□□□□ -0.78
CSMD1-218ENST00000635120 CASC4Q6P4E1 433 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms