RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 GAKO14976 1311 aa23.5■■□□□ 1.35
SMN2-215ENST00000628696 PHF20L1A8MW92 1017 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 GNAI3P08754 354 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 CYP2C8P10632 490 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 OSBPP22059 807 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 GPAT2Q6NUI2 795 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 SCYL3Q8IZE3 742 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 NEUROD6Q96NK8 337 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 ADGRA2Q96PE1 1338 aa23.49■■□□□ 1.35
SMN2-215ENST00000628696 BTDP43251 543 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 MTFR1Q15390 333 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 GADL1Q6ZQY3 521 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 SH3BP5LQ7L8J4 393 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 MYPNQ86TC9 1320 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 ATRNL1Q5VV63 1379 aa23.48■■□□□ 1.35
SMN2-215ENST00000628696 DDTLA6NHG4 134 aaPredicted RBP23.47■■□□□ 1.35
SMN2-215ENST00000628696 SLURP2P0DP57 97 aa23.47■■□□□ 1.35
SMN2-215ENST00000628696 MVPQ14764 893 aaKnown RBP23.47■■□□□ 1.35
SMN2-215ENST00000628696 ERICH6Q7L0X2 663 aa23.47■■□□□ 1.35
SMN2-215ENST00000628696 FASTKD5Q7L8L6 764 aaKnown RBP23.47■■□□□ 1.35
SMN2-215ENST00000628696 DDX4Q9NQI0 724 aaKnown RBP23.47■■□□□ 1.35
SMN2-215ENST00000628696 BIN2Q9UBW5 565 aaPredicted RBP23.47■■□□□ 1.35
SMN2-215ENST00000628696 ZBTB22O15209 634 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 MGAMO43451 1857 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 PTPRAP18433 802 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 GRK4P32298 578 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
SMN2-215ENST00000628696 GORABQ5T7V8 394 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 ARHGAP45Q92619 1136 aa23.46■■□□□ 1.35
SMN2-215ENST00000628696 FAM163AQ96GL9 167 aaPredicted RBP23.46■■□□□ 1.35
SMN2-215ENST00000628696 MROH7-TTC4A0A0A0MT08 1334 aa23.45■■□□□ 1.34
SMN2-215ENST00000628696 A0A0G2JLL6 359 aaPredicted RBP23.45■■□□□ 1.34
SMN2-215ENST00000628696 BCRP11274 1271 aa23.45■■□□□ 1.34
SMN2-215ENST00000628696 FCGRTP55899 365 aa23.45■■□□□ 1.34
SMN2-215ENST00000628696 MECOMQ03112 1051 aa23.45■■□□□ 1.34
SMN2-215ENST00000628696 PRRT2Q7Z6L0 340 aaPredicted RBP23.45■■□□□ 1.34
SMN2-215ENST00000628696 AFG3L2Q9Y4W6 797 aa23.45■■□□□ 1.34
SMN2-215ENST00000628696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.44■■□□□ 1.34
SMN2-215ENST00000628696 DOCK1Q14185 1865 aa23.43■■□□□ 1.34
SMN2-215ENST00000628696 RFX7Q2KHR2 1363 aa23.43■■□□□ 1.34
SMN2-215ENST00000628696 CTNND1O60716 968 aaKnown RBP23.43■■□□□ 1.34
SMN2-215ENST00000628696 MAP3K10Q02779 954 aa23.43■■□□□ 1.34
SMN2-215ENST00000628696 PRKCZQ05513 592 aa23.43■■□□□ 1.34
SMN2-215ENST00000628696 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.43■■□□□ 1.34
SMN2-215ENST00000628696 PTPRFP10586 1907 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 GPR75-ASB3A0A0A6YYF3 556 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 TRIM75PA6NK02 468 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 MTX1Q13505 466 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 TBC1D9Q6ZT07 1266 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 CCDC84Q86UT8 332 aaPredicted RBP23.42■■□□□ 1.34
SMN2-215ENST00000628696 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
SMN2-215ENST00000628696 CEP290O15078 2479 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 PHIPQ8WWQ0 1821 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 IPO8O15397 1037 aaKnown RBP23.41■■□□□ 1.34
SMN2-215ENST00000628696 GNAI2P04899 355 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 LDHCP07864 332 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 CCL5P13501 91 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 RHBDL3P58872 404 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 UBXN2AP68543 259 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 GSTO1P78417 241 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMN2-215ENST00000628696 PI16Q6UXB8 463 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 SPATA5Q8NB90 893 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 FRAT1Q92837 279 aaPredicted RBP23.41■■□□□ 1.34
SMN2-215ENST00000628696 SHISA4Q96DD7 197 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 RNF208Q9H0X6 261 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 RAI14Q9P0K7 980 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 GABRQQ9UN88 632 aa23.41■■□□□ 1.34
SMN2-215ENST00000628696 COLQQ9Y215 455 aaPredicted RBP23.41■■□□□ 1.34
SMN2-215ENST00000628696 FAM196BA6NMK8 535 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 H0YGN5 161 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 NKX2-3Q8TAU0 364 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 SMCR8Q8TEV9 937 aaPredicted RBP23.4■■□□□ 1.34
SMN2-215ENST00000628696 ZNF384Q8TF68 577 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 DPF3Q92784 378 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 TNNQ9UQP3 1299 aa23.4■■□□□ 1.34
SMN2-215ENST00000628696 TRIM27P14373 513 aa23.39■■□□□ 1.33
SMN2-215ENST00000628696 CLUAP1Q96AJ1 413 aa23.39■■□□□ 1.33
SMN2-215ENST00000628696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.39■■□□□ 1.33
SMN2-215ENST00000628696 SLC45A1Q9Y2W3 748 aa23.39■■□□□ 1.33
SMN2-215ENST00000628696 GJB1P08034 283 aa23.38■■□□□ 1.33
SMN2-215ENST00000628696 SLAIN1Q8ND83 568 aa23.38■■□□□ 1.33
SMN2-215ENST00000628696 NSUN4Q96CB9 384 aaKnown RBP23.38■■□□□ 1.33
SMN2-215ENST00000628696 PNMA6EA0A0J9YXQ4 647 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 CCER2I3L3R5 266 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 ADCY3O60266 1144 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 TBC1D12O60347 775 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 BCAR3O75815 825 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 GJA8P48165 433 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 ATF7IPQ6VMQ6 1270 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 LRP2BPQ9P2M1 347 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 DOCK3Q8IZD9 2030 aa23.37■■□□□ 1.33
SMN2-215ENST00000628696 TNPO2O14787 897 aaKnown RBP23.36■■□□□ 1.33
SMN2-215ENST00000628696 NPM3O75607 178 aaKnown RBP23.36■■□□□ 1.33
SMN2-215ENST00000628696 FLT3LGP49771 235 aa23.36■■□□□ 1.33
SMN2-215ENST00000628696 TAOK2Q9UL54 1235 aa23.36■■□□□ 1.33
SMN2-215ENST00000628696 AGTPBP1Q9UPW5 1226 aa23.36■■□□□ 1.33
SMN2-215ENST00000628696 MAP4K4O95819 1239 aaPredicted RBP23.35■■□□□ 1.33
SMN2-215ENST00000628696 UQCRFS1P1P0C7P4 283 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 ELNP15502 786 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms