RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
SMN2-214ENST00000626847 IRF2BPLQ9H1B7 796 aa9.76□□□□□ -0.85
SMN2-214ENST00000626847 CPSF2Q9P2I0 782 aaKnown RBP9.76□□□□□ -0.85
SMN2-214ENST00000626847 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
SMN2-214ENST00000626847 FMN2Q9NZ56 1722 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 C21orf2O43822 256 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 CYP2C19P33261 490 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 FLT3P36888 993 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 WAPLQ7Z5K2 1190 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 RBM12BQ8IXT5 1001 aaKnown RBP9.75□□□□□ -0.85
SMN2-214ENST00000626847 CYLDQ9NQC7 956 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 STK32BQ9NY57 414 aa9.75□□□□□ -0.85
SMN2-214ENST00000626847 BACH1O14867 736 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 CBFA2T2O43439 604 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 PPFIA4O75335 1185 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 TPM1P09493 284 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 PAX3P23760 479 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 NOLC1Q14978 699 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMN2-214ENST00000626847 SLC15A2Q16348 729 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 RPUSD2Q8IZ73 545 aaKnown RBP9.74□□□□□ -0.85
SMN2-214ENST00000626847 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 TMPRSS4Q9NRS4 437 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 IRAK4Q9NWZ3 460 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 NRXN1Q9ULB1 1477 aa9.74□□□□□ -0.85
SMN2-214ENST00000626847 H3BRB1 525 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 HMMRO75330 724 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 SKILP12757 684 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMN2-214ENST00000626847 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 MARSP56192 900 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 RBBP5Q15291 538 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 CLEC4GQ6UXB4 293 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 OTUD6AQ7L8S5 288 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 PTF1AQ7RTS3 328 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 TRIM74Q86UV6 250 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 TRIM73Q86UV7 250 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 GLYCTKQ8IVS8 523 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 BHMTQ93088 406 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 METTL14Q9HCE5 456 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 PRDM11Q9NQV5 511 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 EGFL7Q9UHF1 273 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 SMARCA5O60264 1052 aaPredicted RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 NAT1P18440 290 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 WEE1P30291 646 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 PRPHP41219 470 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 NASPP49321 788 aaPredicted RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 RBM5P52756 815 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMN2-214ENST00000626847 GDF10P55107 478 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 HNRNPH2P55795 449 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 CCDC73Q6ZRK6 1079 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 SMCR8Q8TEV9 937 aaPredicted RBP9.73□□□□□ -0.85
SMN2-214ENST00000626847 TEKT1Q969V4 418 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
SMN2-214ENST00000626847 ADCY9O60503 1353 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 PLEKHH1Q9ULM0 1364 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 SH3BP5O60239 455 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 GRIN3BO60391 1043 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
SMN2-214ENST00000626847 CAND2O75155 1236 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 KIF4AO95239 1232 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 MAGEA9P43362 315 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 GPS2Q13227 327 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 CCDC116Q8IYX3 515 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 GTF3C2Q8WUA4 911 aaPredicted RBP9.72□□□□□ -0.85
SMN2-214ENST00000626847 VTI1AQ96AJ9 217 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 PDLIM2Q96JY6 352 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 DRC1Q96MC2 740 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 AGBL1Q96MI9 1066 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 RMI1Q9H9A7 625 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 SERTAD1Q9UHV2 236 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
SMN2-214ENST00000626847 UNCXA6NJT0 531 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 MYO1CO00159 1063 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 SGSM2O43147 1006 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 CCDC175P0C221 793 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 TNNT1P13805 278 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 HDLBPQ00341 1268 aaKnown RBP9.71□□□□□ -0.86
SMN2-214ENST00000626847 IFT88Q13099 833 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 LEKR1Q6ZMV7 388 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 TAX1BP1Q86VP1 789 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 NLGN2Q8NFZ4 835 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 CCDC26Q8TAB7 109 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 PPM1EQ8WY54 764 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 WWC3Q9ULE0 1092 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
SMN2-214ENST00000626847 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms