RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ERO1BQ86YB8 467 aa22.01■■□□□ 1.11
SCAMP4-213ENST00000621748 ERC1Q8IUD2 1116 aa22.01■■□□□ 1.11
SCAMP4-213ENST00000621748 BRI3BPQ8WY22 251 aa22.01■■□□□ 1.11
SCAMP4-213ENST00000621748 DDTLA6NHG4 134 aaPredicted RBP22■■□□□ 1.11
SCAMP4-213ENST00000621748 CCDC85CA6NKD9 419 aa22■■□□□ 1.11
SCAMP4-213ENST00000621748 PICALMQ13492 652 aa22■■□□□ 1.11
SCAMP4-213ENST00000621748 PDE3AQ14432 1141 aa22■■□□□ 1.11
SCAMP4-213ENST00000621748 CTU1Q7Z7A3 348 aaKnown RBP22■■□□□ 1.11
SCAMP4-213ENST00000621748 ATRNL1Q5VV63 1379 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 CCL15-CCL14A0A0B4J2E2 113 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 GTF2A2P52657 109 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 CCL15Q16663 113 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 OTUD7BQ6GQQ9 843 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 AACSQ86V21 672 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 ZSCAN29Q8IWY8 852 aaPredicted RBP21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 RHPN1Q8TCX5 695 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 IL1RAPL2Q9NP60 686 aa21.99■■□□□ 1.11
SCAMP4-213ENST00000621748 IRF6O14896 467 aa21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 FKTNO75072 461 aa21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 SLURP2P0DP57 97 aa21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 CRHR2Q13324 411 aa21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 HSP90AB4PQ58FF6 505 aa21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 PIH1D3Q9NQM4 214 aaKnown RBP21.98■■□□□ 1.11
SCAMP4-213ENST00000621748 PHF20L1A8MW92 1017 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 APBB1O00213 710 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 HMMRO75330 724 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 MAP3K10Q02779 954 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 PPIL2Q13356 520 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 NAA16Q6N069 864 aaPredicted RBP21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 NDUFB9Q9Y6M9 179 aa21.97■■□□□ 1.11
SCAMP4-213ENST00000621748 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
SCAMP4-213ENST00000621748 MAP4K4O95819 1239 aaPredicted RBP21.96■■□□□ 1.11
SCAMP4-213ENST00000621748 PPATQ06203 517 aa21.96■■□□□ 1.11
SCAMP4-213ENST00000621748 ADGRA1Q86SQ6 560 aa21.96■■□□□ 1.11
SCAMP4-213ENST00000621748 MAST2Q6P0Q8 1798 aa21.95■■□□□ 1.1
SCAMP4-213ENST00000621748 NOL9Q5SY16 702 aaKnown RBP21.95■■□□□ 1.1
SCAMP4-213ENST00000621748 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
SCAMP4-213ENST00000621748 SH3RF3Q8TEJ3 882 aaPredicted RBP21.95■■□□□ 1.1
SCAMP4-213ENST00000621748 CETPP11597 493 aa21.94■■□□□ 1.1
SCAMP4-213ENST00000621748 SNAPC2Q13487 334 aa21.94■■□□□ 1.1
SCAMP4-213ENST00000621748 TEX11Q8IYF3 940 aa21.94■■□□□ 1.1
SCAMP4-213ENST00000621748 KIF1BPQ96EK5 621 aa21.94■■□□□ 1.1
SCAMP4-213ENST00000621748 AATFQ9NY61 560 aaKnown RBP eCLIP21.94■■□□□ 1.1
SCAMP4-213ENST00000621748 PPP4CP60510 307 aa21.93■■□□□ 1.1
SCAMP4-213ENST00000621748 CLASRPQ8N2M8 674 aaKnown RBP21.93■■□□□ 1.1
SCAMP4-213ENST00000621748 OSBPL5Q9H0X9 879 aaPredicted RBP21.93■■□□□ 1.1
SCAMP4-213ENST00000621748 ANTXR1Q9H6X2 564 aa21.93■■□□□ 1.1
SCAMP4-213ENST00000621748 BTBD19C9JJ37 291 aa21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 RAB11FIP3O75154 756 aa21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 BAG3O95817 575 aa21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 TAF1CQ15572 869 aaPredicted RBP21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 PKN2Q16513 984 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 NOL10Q9BSC4 688 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 CDK5RAP2Q96SN8 1893 aa21.92■■□□□ 1.1
SCAMP4-213ENST00000621748 IGSF3O75054 1194 aa21.91■■□□□ 1.1
SCAMP4-213ENST00000621748 IDH1O75874 414 aaKnown RBP21.91■■□□□ 1.1
SCAMP4-213ENST00000621748 SCYL3Q8IZE3 742 aa21.91■■□□□ 1.1
SCAMP4-213ENST00000621748 BCL11AQ9H165 835 aa21.91■■□□□ 1.1
SCAMP4-213ENST00000621748 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
SCAMP4-213ENST00000621748 FAM196BA6NMK8 535 aa21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 TBC1D12O60347 775 aa21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 CYP7A1P22680 504 aa21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 ZFYVE28Q9HCC9 887 aa21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 HPS5Q9UPZ3 1129 aa21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 COL2A1P02458 1487 aaPredicted RBP21.9■■□□□ 1.1
SCAMP4-213ENST00000621748 IFIT2P09913 472 aaKnown RBP21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 PLCG2P16885 1265 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 DYNLL1P63167 89 aaKnown RBP21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 CAP1Q01518 475 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 SP3Q02447 781 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 MOGSQ13724 837 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 CD99L2Q8TCZ2 262 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 TGFBRAP1Q8WUH2 860 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 ZHX2Q9Y6X8 837 aa21.89■■□□□ 1.09
SCAMP4-213ENST00000621748 FOCADQ5VW36 1801 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 CTNND1O60716 968 aaKnown RBP21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 PTPRAP18433 802 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 MAPKAPK5Q8IW41 473 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 MAGEB6Q8N7X4 407 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 ZCCHC17Q9NP64 241 aaKnown RBP21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 PICK1Q9NRD5 415 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 DOCK1Q14185 1865 aa21.88■■□□□ 1.09
SCAMP4-213ENST00000621748 CXCL11O14625 94 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 FBXO46Q6PJ61 603 aaPredicted RBP21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 OTOP1Q7RTM1 612 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 MIGA1Q8NAN2 632 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 ERO1AQ96HE7 468 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 AFG3L2Q9Y4W6 797 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 TRIM17Q9Y577 477 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 PHIPQ8WWQ0 1821 aa21.87■■□□□ 1.09
SCAMP4-213ENST00000621748 FLT1P17948 1338 aa21.86■■□□□ 1.09
SCAMP4-213ENST00000621748 SIPA1L1O43166 1804 aa21.86■■□□□ 1.09
SCAMP4-213ENST00000621748 TLR2O60603 784 aa21.86■■□□□ 1.09
SCAMP4-213ENST00000621748 MAP3K12Q12852 859 aa21.86■■□□□ 1.09
SCAMP4-213ENST00000621748 ANKRD23Q86SG2 305 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms