RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 TMX3Q96JJ7 454 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 LARGE1O95461 756 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 TOB2Q14106 344 aaPredicted RBP22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 GIMAP6Q6P9H5 292 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 HHIPL2Q6UWX4 724 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 MB21D2Q8IYB1 491 aaPredicted RBP22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 SLKQ9H2G2 1235 aaPredicted RBP22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 MCM9Q9NXL9 1143 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 SAP30BPQ9UHR5 308 aaKnown RBP22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 ECM29Q5VYK3 1845 aa22.04■■□□□ 1.12
SEMA6C-210ENST00000621728 DDX60LQ5H9U9 1706 aaKnown RBP22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 RBM5P52756 815 aaKnown RBP eCLIP22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 EXOSC10Q01780 885 aaKnown RBP22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 Q6ZUG5 572 aa22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 DHX32Q7L7V1 743 aaKnown RBP22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 GMLQ99445 158 aa22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 GPHNQ9NQX3 736 aaPredicted RBP22.03■■□□□ 1.12
SEMA6C-210ENST00000621728 B4E1Z4 1266 aa22.02■■□□□ 1.12
SEMA6C-210ENST00000621728 ANTXR2P58335 489 aa22.02■■□□□ 1.12
SEMA6C-210ENST00000621728 AKNAD1Q5T1N1 836 aa22.02■■□□□ 1.12
SEMA6C-210ENST00000621728 CDC42EP5Q6NZY7 148 aa22.02■■□□□ 1.12
SEMA6C-210ENST00000621728 USP40Q9NVE5 1235 aa22.02■■□□□ 1.12
SEMA6C-210ENST00000621728 YBX3P16989 372 aaKnown RBP eCLIP22.02■■□□□ 1.11
SEMA6C-210ENST00000621728 CYB5R4Q7L1T6 521 aa22.02■■□□□ 1.11
SEMA6C-210ENST00000621728 NCOA7Q8NI08 942 aa22.02■■□□□ 1.11
SEMA6C-210ENST00000621728 ZDHHC15Q96MV8 337 aa22.02■■□□□ 1.11
SEMA6C-210ENST00000621728 FLT1P17948 1338 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 MYH1P12882 1939 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 PLCG2P16885 1265 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 MCM2P49736 904 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 PICALMQ13492 652 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 RRP12Q5JTH9 1297 aaKnown RBP22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 RALYLQ86SE5 291 aaKnown RBP22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 DDX4Q9NQI0 724 aaKnown RBP22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 ANAPC4Q9UJX5 808 aa22.01■■□□□ 1.11
SEMA6C-210ENST00000621728 HMGB1P09429 215 aaKnown RBP22■■□□□ 1.11
SEMA6C-210ENST00000621728 CACNB3P54284 484 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 CIAPIN1Q6FI81 312 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 STAG1Q8WVM7 1258 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 TPCN1Q9ULQ1 816 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 SHTN1A0MZ66 631 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 PRC1O43663 620 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 DTNBO60941 627 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 WDHD1O75717 1129 aaPredicted RBP22■■□□□ 1.11
SEMA6C-210ENST00000621728 CFAP100Q494V2 611 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 MFSD6Q6ZSS7 791 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 TOMM22Q9NS69 142 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 SERPINA10Q9UK55 444 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 LIMCH1Q9UPQ0 1083 aa22■■□□□ 1.11
SEMA6C-210ENST00000621728 SBF1O95248 1867 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 PRDM1O75626 825 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 HDLBPQ00341 1268 aaKnown RBP21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 TRDNQ13061 729 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 SBK1Q52WX2 424 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 CERS3Q8IU89 383 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 BRF1Q92994 677 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 ARPP21Q9UBL0 812 aaPredicted RBP21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 MYO3BQ8WXR4 1341 aa21.99■■□□□ 1.11
SEMA6C-210ENST00000621728 PLCD1P51178 756 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 NFIAQ12857 509 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 MRIQ9BWK5 157 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 ALDH8A1Q9H2A2 487 aaPredicted RBP21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 KDM4AO75164 1064 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 HSP90AA1P07900 732 aaKnown RBP21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 MCM5P33992 734 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 C12orf60Q5U649 245 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 PRMT6Q96LA8 375 aaPredicted RBP21.98■■□□□ 1.11
SEMA6C-210ENST00000621728 FGD1P98174 961 aa21.97■■□□□ 1.11
SEMA6C-210ENST00000621728 ME3Q16798 604 aa21.97■■□□□ 1.11
SEMA6C-210ENST00000621728 TDRD3Q9H7E2 651 aaKnown RBP21.97■■□□□ 1.11
SEMA6C-210ENST00000621728 ZNF541Q9H0D2 1346 aa21.97■■□□□ 1.11
SEMA6C-210ENST00000621728 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
SEMA6C-210ENST00000621728 FZD9O00144 591 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 ST3GAL1Q11201 340 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 NFKBIBQ15653 356 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 NECAB1Q8N987 351 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 POLR3DP05423 398 aaPredicted RBP21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 ZFPM1Q8IX07 1006 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 AGBL3Q8NEM8 1001 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 GJA3Q9Y6H8 435 aa21.96■■□□□ 1.11
SEMA6C-210ENST00000621728 STK3Q13188 491 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 CUL4AQ13619 759 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 SLC44A5Q8NCS7 719 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 ZKSCAN3Q9BRR0 538 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 CNNM2Q9H8M5 875 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 SENP2Q9HC62 589 aa21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.95■■□□□ 1.1
SEMA6C-210ENST00000621728 TNIP1Q15025 636 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 ANKRD1Q15327 319 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 AGXT2Q9BYV1 514 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 KRT23Q9C075 422 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 RNF41Q9H4P4 317 aaPredicted RBP21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 LMNB1P20700 586 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 CCDC83Q8IWF9 413 aa21.94■■□□□ 1.1
SEMA6C-210ENST00000621728 EIF6P56537 245 aaKnown RBP21.93■■□□□ 1.1
SEMA6C-210ENST00000621728 TCP10Q12799 353 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms