RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ARMT1Q9H993 441 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 USP5P45974 858 aa22.38■■□□□ 1.17
CIRBP-245ENST00000621399 FKBP1BP68106 108 aa22.38■■□□□ 1.17
CIRBP-245ENST00000621399 SKAP1Q86WV1 359 aa22.38■■□□□ 1.17
CIRBP-245ENST00000621399 LCORLQ8N3X6 602 aa22.38■■□□□ 1.17
CIRBP-245ENST00000621399 HOOK2Q96ED9 719 aa22.38■■□□□ 1.17
CIRBP-245ENST00000621399 CRNKL1Q9BZJ0 848 aaKnown RBP22.38■■□□□ 1.17
CIRBP-245ENST00000621399 OSBPL5Q9H0X9 879 aaPredicted RBP22.38■■□□□ 1.17
CIRBP-245ENST00000621399 PPP1R12BO60237 982 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-245ENST00000621399 OSBP2Q969R2 916 aa22.37■■□□□ 1.17
CIRBP-245ENST00000621399 TLL2Q9Y6L7 1015 aa22.37■■□□□ 1.17
CIRBP-245ENST00000621399 RPAP1Q9BWH6 1393 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-245ENST00000621399 FLT1P17948 1338 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 GSPT1P15170 499 aaKnown RBP22.36■■□□□ 1.17
CIRBP-245ENST00000621399 MOB2Q70IA6 237 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 SAPCD2Q86UD0 394 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 TICAM2Q86XR7 235 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 CSRNP1Q96S65 589 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 ANGEL1Q9UNK9 670 aaKnown RBP22.36■■□□□ 1.17
CIRBP-245ENST00000621399 FZD1Q9UP38 647 aa22.36■■□□□ 1.17
CIRBP-245ENST00000621399 DDTLA6NHG4 134 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-245ENST00000621399 HUNKP57058 714 aa22.35■■□□□ 1.17
CIRBP-245ENST00000621399 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
CIRBP-245ENST00000621399 SSC5DA1L4H1 1573 aa22.34■■□□□ 1.17
CIRBP-245ENST00000621399 UBE2Q2LH0YL09 131 aa22.34■■□□□ 1.17
CIRBP-245ENST00000621399 M0R2C6 588 aa22.34■■□□□ 1.17
CIRBP-245ENST00000621399 SDSP20132 328 aa22.34■■□□□ 1.17
CIRBP-245ENST00000621399 DCAF15Q66K64 600 aa22.34■■□□□ 1.17
CIRBP-245ENST00000621399 SAP30BPQ9UHR5 308 aaKnown RBP22.34■■□□□ 1.17
CIRBP-245ENST00000621399 TRPM7Q96QT4 1865 aa22.33■■□□□ 1.17
CIRBP-245ENST00000621399 PRKAB2O43741 272 aa22.33■■□□□ 1.17
CIRBP-245ENST00000621399 USP2O75604 605 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-245ENST00000621399 MIGA2Q7L4E1 593 aa22.33■■□□□ 1.17
CIRBP-245ENST00000621399 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.17
CIRBP-245ENST00000621399 STRBPQ96SI9 672 aaKnown RBP22.33■■□□□ 1.17
CIRBP-245ENST00000621399 SEC62Q99442 399 aaKnown RBP22.33■■□□□ 1.17
CIRBP-245ENST00000621399 DHX36Q9H2U1 1008 aaKnown RBP22.33■■□□□ 1.17
CIRBP-245ENST00000621399 SLC4A4Q9Y6R1 1079 aa22.33■■□□□ 1.17
CIRBP-245ENST00000621399 GPAA1O43292 621 aa22.32■■□□□ 1.16
CIRBP-245ENST00000621399 IREB2P48200 963 aaKnown RBP22.32■■□□□ 1.16
CIRBP-245ENST00000621399 DEFB115Q30KQ5 88 aa22.32■■□□□ 1.16
CIRBP-245ENST00000621399 DNAJC5GQ8N7S2 189 aa22.32■■□□□ 1.16
CIRBP-245ENST00000621399 PALD1Q9ULE6 856 aa22.32■■□□□ 1.16
CIRBP-245ENST00000621399 ATRNL1Q5VV63 1379 aa22.32■■□□□ 1.16
CIRBP-245ENST00000621399 COL2A1P02458 1487 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-245ENST00000621399 HIP1O00291 1037 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 MAP3K11Q16584 847 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 PAXIP1Q6ZW49 1069 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-245ENST00000621399 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 FAM227BQ96M60 508 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 ZNF341Q9BYN7 854 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 HELLSQ9NRZ9 838 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 DIAPH3Q9NSV4 1193 aa22.31■■□□□ 1.16
CIRBP-245ENST00000621399 MKRN1Q9UHC7 482 aaKnown RBP22.31■■□□□ 1.16
CIRBP-245ENST00000621399 RASSF10A6NK89 507 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 GNAT2P19087 354 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 NMIQ13287 307 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-245ENST00000621399 HHIPL1Q96JK4 782 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 DCP1AQ9NPI6 582 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-245ENST00000621399 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 MCM9Q9NXL9 1143 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 PI4KBQ9UBF8 816 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
CIRBP-245ENST00000621399 MYH7P12883 1935 aa22.29■■□□□ 1.16
CIRBP-245ENST00000621399 HLA-DOAP06340 250 aa22.29■■□□□ 1.16
CIRBP-245ENST00000621399 SLC4A8Q2Y0W8 1093 aa22.29■■□□□ 1.16
CIRBP-245ENST00000621399 MCMDC2Q4G0Z9 681 aa22.29■■□□□ 1.16
CIRBP-245ENST00000621399 LDLRAD1Q5T700 205 aa22.29■■□□□ 1.16
CIRBP-245ENST00000621399 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-245ENST00000621399 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 APPP05067 770 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 POLR3DP05423 398 aaPredicted RBP22.28■■□□□ 1.16
CIRBP-245ENST00000621399 ZNF157P51786 506 aaPredicted RBP22.28■■□□□ 1.16
CIRBP-245ENST00000621399 MAP3K9P80192 1104 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 RGMBQ6NW40 437 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 CCDC129Q6ZRS4 1044 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 TTC6Q86TZ1 520 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
CIRBP-245ENST00000621399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.28■■□□□ 1.16
CIRBP-245ENST00000621399 UNCXA6NJT0 531 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 PATL2C9JE40 543 aaKnown RBP22.27■■□□□ 1.16
CIRBP-245ENST00000621399 SLURP2P0DP57 97 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 GRM1Q13255 1194 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 CYP4F22Q6NT55 531 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
CIRBP-245ENST00000621399 FOXP4Q8IVH2 680 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-245ENST00000621399 ANKRD13AQ8IZ07 590 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 WRNIP1Q96S55 665 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 TRIM34Q9BYJ4 488 aa22.27■■□□□ 1.16
CIRBP-245ENST00000621399 FAM196BA6NMK8 535 aa22.26■■□□□ 1.15
CIRBP-245ENST00000621399 GSG1L2A8MUP6 293 aa22.26■■□□□ 1.15
CIRBP-245ENST00000621399 TBC1D12O60347 775 aa22.26■■□□□ 1.15
CIRBP-245ENST00000621399 MAP3K10Q02779 954 aa22.26■■□□□ 1.15
CIRBP-245ENST00000621399 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
CIRBP-245ENST00000621399 CRACR2BQ8N4Y2 399 aaPredicted RBP22.26■■□□□ 1.15
CIRBP-245ENST00000621399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.26■■□□□ 1.152e-8■■□□□ 13.6
CIRBP-245ENST00000621399 HERC5Q9UII4 1024 aaKnown RBP22.26■■□□□ 1.15
CIRBP-245ENST00000621399 ECE1P42892 770 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms