RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
HMGN3-203ENST00000620514 EAF2Q96CJ1 260 aaPredicted RBP21.08■□□□□ 0.97
HMGN3-203ENST00000620514 LRP2BPQ9P2M1 347 aa21.08■□□□□ 0.97
HMGN3-203ENST00000620514 DDTLA6NHG4 134 aaPredicted RBP21.07■□□□□ 0.96
HMGN3-203ENST00000620514 LDHCP07864 332 aa21.07■□□□□ 0.96
HMGN3-203ENST00000620514 GSTO1P78417 241 aa21.07■□□□□ 0.96
HMGN3-203ENST00000620514 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
HMGN3-203ENST00000620514 HPS5Q9UPZ3 1129 aa21.07■□□□□ 0.96
HMGN3-203ENST00000620514 DOCK2Q92608 1830 aa21.06■□□□□ 0.96
HMGN3-203ENST00000620514 CYP2E1P05181 493 aaPredicted RBP21.06■□□□□ 0.96
HMGN3-203ENST00000620514 CETPP11597 493 aa21.06■□□□□ 0.96
HMGN3-203ENST00000620514 PPATQ06203 517 aa21.06■□□□□ 0.96
HMGN3-203ENST00000620514 TAF1CQ15572 869 aaPredicted RBP21.06■□□□□ 0.96
HMGN3-203ENST00000620514 PKN2Q16513 984 aaKnown RBP21.06■□□□□ 0.96
HMGN3-203ENST00000620514 PHF20L1A8MW92 1017 aa21.05■□□□□ 0.96
HMGN3-203ENST00000620514 BTBD19C9JJ37 291 aa21.05■□□□□ 0.96
HMGN3-203ENST00000620514 ZAP70P43403 619 aa21.05■□□□□ 0.96
HMGN3-203ENST00000620514 SNAPC2Q13487 334 aa21.05■□□□□ 0.96
HMGN3-203ENST00000620514 NOL9Q5SY16 702 aaKnown RBP21.05■□□□□ 0.96
HMGN3-203ENST00000620514 RGS19P49795 217 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 CAP1Q01518 475 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 FBXO46Q6PJ61 603 aaPredicted RBP21.04■□□□□ 0.96
HMGN3-203ENST00000620514 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
HMGN3-203ENST00000620514 CD99L2Q8TCZ2 262 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 ZNF512BQ96KM6 892 aaPredicted RBP21.04■□□□□ 0.96
HMGN3-203ENST00000620514 PIH1D3Q9NQM4 214 aaKnown RBP21.04■□□□□ 0.96
HMGN3-203ENST00000620514 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 TRIM17Q9Y577 477 aa21.04■□□□□ 0.96
HMGN3-203ENST00000620514 SOX10P56693 466 aa21.03■□□□□ 0.96
HMGN3-203ENST00000620514 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
HMGN3-203ENST00000620514 NAA16Q6N069 864 aaPredicted RBP21.03■□□□□ 0.96
HMGN3-203ENST00000620514 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
HMGN3-203ENST00000620514 ZFYVE28Q9HCC9 887 aa21.03■□□□□ 0.96
HMGN3-203ENST00000620514 SP3Q02447 781 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 MAP3K10Q02779 954 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 OTOP1Q7RTM1 612 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 ADGRA1Q86SQ6 560 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 AACSQ86V21 672 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 TEX11Q8IYF3 940 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
HMGN3-203ENST00000620514 ERO1AQ96HE7 468 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 IL1RAPL2Q9NP60 686 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 KCNH4Q9UQ05 1017 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
HMGN3-203ENST00000620514 MYO5AQ9Y4I1 1855 aaKnown RBP21.01■□□□□ 0.95
HMGN3-203ENST00000620514 MAST2Q6P0Q8 1798 aa21.01■□□□□ 0.95
HMGN3-203ENST00000620514 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
HMGN3-203ENST00000620514 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
HMGN3-203ENST00000620514 SCYL3Q8IZE3 742 aa21.01■□□□□ 0.95
HMGN3-203ENST00000620514 OSBPL5Q9H0X9 879 aaPredicted RBP21.01■□□□□ 0.95
HMGN3-203ENST00000620514 AATFQ9NY61 560 aaKnown RBP eCLIP21.01■□□□□ 0.95
HMGN3-203ENST00000620514 FAM196BA6NMK8 535 aa21■□□□□ 0.95
HMGN3-203ENST00000620514 APBB1O00213 710 aa21■□□□□ 0.95
HMGN3-203ENST00000620514 MAP4K4O95819 1239 aaPredicted RBP21■□□□□ 0.95
HMGN3-203ENST00000620514 RHPN1Q8TCX5 695 aa21■□□□□ 0.95
HMGN3-203ENST00000620514 FRMD4AQ9P2Q2 1039 aaPredicted RBP21■□□□□ 0.95
HMGN3-203ENST00000620514 MLLT1Q03111 559 aaPredicted RBP20.99■□□□□ 0.95
HMGN3-203ENST00000620514 MOGSQ13724 837 aa20.99■□□□□ 0.95
HMGN3-203ENST00000620514 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
HMGN3-203ENST00000620514 NOL10Q9BSC4 688 aaKnown RBP20.99■□□□□ 0.95
HMGN3-203ENST00000620514 PTPRAP18433 802 aa20.98■□□□□ 0.95
HMGN3-203ENST00000620514 ANTXR1Q9H6X2 564 aa20.98■□□□□ 0.95
HMGN3-203ENST00000620514 EFCC1Q9HA90 598 aa20.98■□□□□ 0.95
HMGN3-203ENST00000620514 ZCCHC17Q9NP64 241 aaKnown RBP20.98■□□□□ 0.95
HMGN3-203ENST00000620514 PICK1Q9NRD5 415 aa20.98■□□□□ 0.95
HMGN3-203ENST00000620514 ZHX2Q9Y6X8 837 aa20.98■□□□□ 0.95
HMGN3-203ENST00000620514 COL2A1P02458 1487 aaPredicted RBP20.97■□□□□ 0.95
HMGN3-203ENST00000620514 TBC1D12O60347 775 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 TLR2O60603 784 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 HMMRO75330 724 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 BAG3O95817 575 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 PPP4CP60510 307 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 ANKRD23Q86SG2 305 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 CCDC84Q86UT8 332 aaPredicted RBP20.97■□□□□ 0.95
HMGN3-203ENST00000620514 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
HMGN3-203ENST00000620514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.97■□□□□ 0.95
HMGN3-203ENST00000620514 PDHXO00330 501 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 CXCL11O14625 94 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 CTNND1O60716 968 aaKnown RBP20.96■□□□□ 0.95
HMGN3-203ENST00000620514 IDH1O75874 414 aaKnown RBP20.96■□□□□ 0.95
HMGN3-203ENST00000620514 CYP7A1P22680 504 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 DYNLL1P63167 89 aaKnown RBP20.96■□□□□ 0.95
HMGN3-203ENST00000620514 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 TGFBRAP1Q8WUH2 860 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 PTPN22Q9Y2R2 807 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 AFG3L2Q9Y4W6 797 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 DOCK1Q14185 1865 aa20.96■□□□□ 0.95
HMGN3-203ENST00000620514 PLCG2P16885 1265 aa20.95■□□□□ 0.94
HMGN3-203ENST00000620514 PDE3AQ14432 1141 aa20.95■□□□□ 0.94
HMGN3-203ENST00000620514 RRP1BQ14684 758 aaKnown RBP20.95■□□□□ 0.94
HMGN3-203ENST00000620514 GPAT2Q6NUI2 795 aa20.95■□□□□ 0.94
HMGN3-203ENST00000620514 KIF1BPQ96EK5 621 aa20.95■□□□□ 0.94
HMGN3-203ENST00000620514 ARHGAP39Q9C0H5 1083 aa20.95■□□□□ 0.94
HMGN3-203ENST00000620514 CLASRPQ8N2M8 674 aaKnown RBP20.94■□□□□ 0.94
HMGN3-203ENST00000620514 CHMP4BQ9H444 224 aaKnown RBP20.94■□□□□ 0.94
HMGN3-203ENST00000620514 CPA4Q9UI42 421 aa20.94■□□□□ 0.94
HMGN3-203ENST00000620514 FLT1P17948 1338 aa20.94■□□□□ 0.94
HMGN3-203ENST00000620514 ZSWIM8A7E2V4 1837 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms