RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 UBE4AQ14139 1066 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 CCDC129Q6ZRS4 1044 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 SPATA5Q8NB90 893 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 FAM227BQ96M60 508 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
SRRT-216ENST00000618262 GLRX3O76003 335 aaKnown RBP14.09□□□□□ -0.15
SRRT-216ENST00000618262 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 PAG1Q9NWQ8 432 aa14.09□□□□□ -0.15
SRRT-216ENST00000618262 NFKBIEO00221 500 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 ERC2O15083 957 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 PRDX5P30044 214 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 PRELPP51888 382 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 PPP2R5AQ15172 486 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 CXorf38Q8TB03 319 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 CD209Q9NNX6 404 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 NRXN2Q9P2S2 1712 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 KIF3CO14782 793 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 PDCL2Q8N4E4 241 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 PPME1Q9Y570 386 aa14.08□□□□□ -0.16
SRRT-216ENST00000618262 H0YHG0 523 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 ATP2B4P23634 1241 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 SCNN1DP51172 638 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 SARNPP82979 210 aaKnown RBP14.07□□□□□ -0.16
SRRT-216ENST00000618262 FRMD4BQ9Y2L6 1034 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 DDX49Q9Y6V7 483 aaKnown RBP14.07□□□□□ -0.16
SRRT-216ENST00000618262 PES1O00541 588 aaKnown RBP14.07□□□□□ -0.16
SRRT-216ENST00000618262 TRAK2O60296 914 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 DIXDC1Q155Q3 683 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 CXorf56Q9H5V9 222 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 ATP5JP18859 108 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 KIAA0825Q8IV33 1275 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 TRERF1Q96PN7 1200 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 TAOK3Q9H2K8 898 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 RASSF4Q9H2L5 321 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 OGFRQ9NZT2 677 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 NOL7Q9UMY1 257 aaKnown RBP14.07□□□□□ -0.16
SRRT-216ENST00000618262 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
SRRT-216ENST00000618262 QSER1Q2KHR3 1735 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 ECE2O60344 883 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 KIF4AO95239 1232 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 GJA3Q9Y6H8 435 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 TTLL5Q6EMB2 1281 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 ZNF804AQ7Z570 1209 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 STAP2Q9UGK3 403 aa14.06□□□□□ -0.16
SRRT-216ENST00000618262 MCM4P33991 863 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 SHTN1A0MZ66 631 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 ABCD1P33897 745 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 FBXO33Q7Z6M2 555 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 CNTROBQ8N137 903 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 HAUS7Q99871 368 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 COL1A1P02452 1464 aaPredicted RBP14.05□□□□□ -0.16
SRRT-216ENST00000618262 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
SRRT-216ENST00000618262 YDJCA8MPS7 323 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 GNL3LQ9NVN8 582 aaKnown RBP14.04□□□□□ -0.16
SRRT-216ENST00000618262 NAT1P18440 290 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 C8orf34Q49A92 452 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 MAF1Q9H063 256 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 A0A0D9SFI3 127 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 CAND2O75155 1236 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 C11orf91Q3C1V1 193 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
SRRT-216ENST00000618262 GTF2F1P35269 517 aaKnown RBP eCLIP14.03□□□□□ -0.165e-6■■■■□ 24.4
SRRT-216ENST00000618262 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
SRRT-216ENST00000618262 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
SRRT-216ENST00000618262 ADGRA1Q86SQ6 560 aa14.03□□□□□ -0.16
SRRT-216ENST00000618262 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
SRRT-216ENST00000618262 PNMA2Q9UL42 364 aa14.03□□□□□ -0.16
SRRT-216ENST00000618262 SLKQ9H2G2 1235 aaPredicted RBP14.03□□□□□ -0.16
SRRT-216ENST00000618262 PEX14O75381 377 aa14.02□□□□□ -0.16
SRRT-216ENST00000618262 CERS5Q8N5B7 392 aa14.02□□□□□ -0.16
SRRT-216ENST00000618262 PRIMPOLQ96LW4 560 aa14.02□□□□□ -0.16
SRRT-216ENST00000618262 OSBPL3Q9H4L5 887 aa14.02□□□□□ -0.16
SRRT-216ENST00000618262 MCM5P33992 734 aa14.02□□□□□ -0.17
SRRT-216ENST00000618262 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.17
SRRT-216ENST00000618262 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.17
SRRT-216ENST00000618262 JDP2Q8WYK2 163 aa14.02□□□□□ -0.17
SRRT-216ENST00000618262 EYA3Q99504 573 aa14.02□□□□□ -0.17
SRRT-216ENST00000618262 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.17
SRRT-216ENST00000618262 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
SRRT-216ENST00000618262 RNF181Q9P0P0 153 aa14.02□□□□□ -0.17
SRRT-216ENST00000618262 U2AF2P26368 475 aaKnown RBP eCLIP14.01□□□□□ -0.173e-8■■■□□ 16.6
SRRT-216ENST00000618262 TERF2Q15554 542 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 SWT1Q5T5J6 900 aaKnown RBP14.01□□□□□ -0.17
SRRT-216ENST00000618262 RPAINQ86UA6 219 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 FAM184AQ8NB25 1140 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 PUS7LQ9H0K6 701 aaKnown RBP14.01□□□□□ -0.17
SRRT-216ENST00000618262 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 LRP5O75197 1615 aa14.01□□□□□ -0.17
SRRT-216ENST00000618262 UQCRFS1P1P0C7P4 283 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms