RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 CCDC85CA6NKD9 419 aa27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 INPP5BP32019 993 aa27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 PPATQ06203 517 aa27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 PPIL2Q13356 520 aa27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 SH3BP5LQ7L8J4 393 aa27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 DDX4Q9NQI0 724 aaKnown RBP27.44■■□□□ 1.98
ARHGEF1-223ENST00000617585 RGS19P49795 217 aa27.43■■□□□ 1.98
ARHGEF1-223ENST00000617585 ZCCHC17Q9NP64 241 aaKnown RBP27.43■■□□□ 1.98
ARHGEF1-223ENST00000617585 COG6Q9Y2V7 657 aa27.43■■□□□ 1.98
ARHGEF1-223ENST00000617585 CCL15-CCL14A0A0B4J2E2 113 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 IRF6O14896 467 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 CYP2E1P05181 493 aaPredicted RBP27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 CRHR2Q13324 411 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 CCL15Q16663 113 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 HSP90AB4PQ58FF6 505 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 CHMP4BQ9H444 224 aaKnown RBP27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 LRP2BPQ9P2M1 347 aa27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 COL2A1P02458 1487 aaPredicted RBP27.42■■□□□ 1.98
ARHGEF1-223ENST00000617585 CDK5RAP2Q96SN8 1893 aa27.41■■□□□ 1.98
ARHGEF1-223ENST00000617585 PHF20L1A8MW92 1017 aa27.41■■□□□ 1.98
ARHGEF1-223ENST00000617585 PDE3AQ14432 1141 aa27.41■■□□□ 1.98
ARHGEF1-223ENST00000617585 EXOC6BQ9Y2D4 811 aa27.41■■□□□ 1.98
ARHGEF1-223ENST00000617585 FOCADQ5VW36 1801 aa27.41■■□□□ 1.98
ARHGEF1-223ENST00000617585 DDTLA6NHG4 134 aaPredicted RBP27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 CETPP11597 493 aa27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 SIRT2Q8IXJ6 389 aa27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 CCDC8Q9H0W5 538 aaPredicted RBP27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 SNRKQ9NRH2 765 aa27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 TLR7Q9NYK1 1049 aaKnown RBP27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 KCNH4Q9UQ05 1017 aa27.4■■□□□ 1.98
ARHGEF1-223ENST00000617585 SNAPC2Q13487 334 aa27.39■■□□□ 1.98
ARHGEF1-223ENST00000617585 TBC1D12O60347 775 aa27.38■■□□□ 1.97
ARHGEF1-223ENST00000617585 PPP4CP60510 307 aa27.38■■□□□ 1.97
ARHGEF1-223ENST00000617585 FAM43AQ8N2R8 423 aa27.38■■□□□ 1.97
ARHGEF1-223ENST00000617585 HMMRO75330 724 aa27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 ZAP70P43403 619 aa27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 DOCK1Q14185 1865 aa27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 NAA16Q6N069 864 aaPredicted RBP27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 FBXO46Q6PJ61 603 aaPredicted RBP27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 RHPN1Q8TCX5 695 aa27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 PHIPQ8WWQ0 1821 aa27.37■■□□□ 1.97
ARHGEF1-223ENST00000617585 PICALMQ13492 652 aa27.36■■□□□ 1.97
ARHGEF1-223ENST00000617585 ZSCAN29Q8IWY8 852 aaPredicted RBP27.36■■□□□ 1.97
ARHGEF1-223ENST00000617585 TMED8Q6PL24 325 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 SCYL3Q8IZE3 742 aa27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 ERO1AQ96HE7 468 aa27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 OSBPL5Q9H0X9 879 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 ZFYVE28Q9HCC9 887 aa27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 HPS5Q9UPZ3 1129 aa27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 PTPRFP10586 1907 aa27.35■■□□□ 1.97
ARHGEF1-223ENST00000617585 BTBD19C9JJ37 291 aa27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 BAG3O95817 575 aa27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 PLCG2P16885 1265 aa27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 SP3Q02447 781 aa27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 TAF1CQ15572 869 aaPredicted RBP27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 KIF1BPQ96EK5 621 aa27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 PIH1D3Q9NQM4 214 aaKnown RBP27.34■■□□□ 1.97
ARHGEF1-223ENST00000617585 CTNND1O60716 968 aaKnown RBP27.33■■□□□ 1.97
ARHGEF1-223ENST00000617585 MOGSQ13724 837 aa27.33■■□□□ 1.97
ARHGEF1-223ENST00000617585 AACSQ86V21 672 aa27.33■■□□□ 1.97
ARHGEF1-223ENST00000617585 SIPA1L1O43166 1804 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 CXCL11O14625 94 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 RAB11FIP3O75154 756 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 C20orf194Q5TEA3 1177 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 OTOP1Q7RTM1 612 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 ADGRA1Q86SQ6 560 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 TEX11Q8IYF3 940 aa27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 SH3RF3Q8TEJ3 882 aaPredicted RBP27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 NOL10Q9BSC4 688 aaKnown RBP27.32■■□□□ 1.96
ARHGEF1-223ENST00000617585 TLR2O60603 784 aa27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 PTPRAP18433 802 aa27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 ANKRD23Q86SG2 305 aa27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 CLASRPQ8N2M8 674 aaKnown RBP27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 IL1RAPL2Q9NP60 686 aa27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 AATFQ9NY61 560 aaKnown RBP eCLIP27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 HTTP42858 3142 aa27.31■■□□□ 1.96
ARHGEF1-223ENST00000617585 ATAD5Q96QE3 1844 aa27.3■■□□□ 1.96
ARHGEF1-223ENST00000617585 SLURP2P0DP57 97 aa27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 CD99L2Q8TCZ2 262 aa27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 DHX36Q9H2U1 1008 aaKnown RBP27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 PICK1Q9NRD5 415 aa27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 AFG3L2Q9Y4W6 797 aa27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 TRIM17Q9Y577 477 aa27.29■■□□□ 1.96
ARHGEF1-223ENST00000617585 CAP1Q01518 475 aa27.28■■□□□ 1.96
ARHGEF1-223ENST00000617585 METTL16Q86W50 562 aaKnown RBP27.28■■□□□ 1.96
ARHGEF1-223ENST00000617585 CERS3Q8IU89 383 aa27.28■■□□□ 1.96
ARHGEF1-223ENST00000617585 HERC5Q9UII4 1024 aaKnown RBP27.28■■□□□ 1.96
ARHGEF1-223ENST00000617585 ANTXR1Q9H6X2 564 aa27.27■■□□□ 1.96
ARHGEF1-223ENST00000617585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.27■■□□□ 1.96
ARHGEF1-223ENST00000617585 ZHX2Q9Y6X8 837 aa27.27■■□□□ 1.96
ARHGEF1-223ENST00000617585 A0A0G2JLL6 359 aaPredicted RBP27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 PRRT2Q7Z6L0 340 aaPredicted RBP27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 EFCC1Q9HA90 598 aa27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 PI4KBQ9UBF8 816 aa27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 PTPN22Q9Y2R2 807 aa27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 MYH1P12882 1939 aa27.26■■□□□ 1.95
ARHGEF1-223ENST00000617585 FLT1P17948 1338 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms