RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 DPF2Q92785 391 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 PPP1R13BQ96KQ4 1090 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 ARMT1Q9H993 441 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 TACC3Q9Y6A5 838 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 SERPINC1P01008 464 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 UQCRFS1P1P0C7P4 283 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 GUCY1A2P33402 732 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 UBASH3AP57075 661 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-215ENST00000617482 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 LPIN2Q92539 896 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 TUBE1Q9UJT0 475 aa13.61□□□□□ -0.23
C11orf54-215ENST00000617482 IKBKBO14920 756 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 PRKAB2O43741 272 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
C11orf54-215ENST00000617482 CNNM3Q8NE01 707 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 FEZ1Q99689 392 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 KCND1Q9NSA2 647 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 KCNH3Q9ULD8 1083 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 FOXN1O15353 648 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 DMTNQ08495 405 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 SGMS1Q86VZ5 419 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
C11orf54-215ENST00000617482 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
C11orf54-215ENST00000617482 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
C11orf54-215ENST00000617482 IGSF3O75054 1194 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 MYL5Q02045 173 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 GOLGA8FQ08AF8 430 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 GOLGA8DPQ0D2H9 430 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 ELF2Q15723 593 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 DZIP3Q86Y13 1208 aaKnown RBP13.59□□□□□ -0.23
C11orf54-215ENST00000617482 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 ATRNO75882 1429 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 FGFR2P21802 821 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 LIFRP42702 1097 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
C11orf54-215ENST00000617482 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 BTG4Q9NY30 223 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
C11orf54-215ENST00000617482 AKAP11Q9UKA4 1901 aa13.58□□□□□ -0.23
C11orf54-215ENST00000617482 CUTAO60888 179 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 SLU7O95391 586 aaKnown RBP13.58□□□□□ -0.24
C11orf54-215ENST00000617482 GRIN1Q05586 938 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 ALX1Q15699 326 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 OLFM4Q6UX06 510 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 KRBA2Q6ZNG9 492 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 SEC31BQ9NQW1 1179 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 GSG1L2A8MUP6 293 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 KIF2AO00139 706 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-215ENST00000617482 NRDCO43847 1150 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-215ENST00000617482 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 TDO2P48775 406 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 HOMER1Q86YM7 354 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
C11orf54-215ENST00000617482 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
C11orf54-215ENST00000617482 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 C4BP0C0L5 1744 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 PSDA5PKW4 1024 aaPredicted RBP13.57□□□□□ -0.24
C11orf54-215ENST00000617482 SLC5A1P13866 664 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 BMP6P22004 513 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
C11orf54-215ENST00000617482 BCAMP50895 628 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 PDE4BQ07343 736 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 DIS3L2Q8IYB7 885 aaKnown RBP13.57□□□□□ -0.24
C11orf54-215ENST00000617482 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 MIGA1Q8NAN2 632 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 SLC4A4Q9Y6R1 1079 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 MROH5Q6ZUA9 1318 aa13.57□□□□□ -0.24
C11orf54-215ENST00000617482 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
C11orf54-215ENST00000617482 A0A0G2JS52 829 aa13.56□□□□□ -0.24
C11orf54-215ENST00000617482 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
C11orf54-215ENST00000617482 MMP1P03956 469 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms