RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
TARDBP-218ENST00000617172 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
TARDBP-218ENST00000617172 BTBD19C9JJ37 291 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 CXCL11O14625 94 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 TBC1D12O60347 775 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 TLR2O60603 784 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 BAG3O95817 575 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 MCAMP43121 646 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 RHBDL3P58872 404 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 KIF22Q14807 665 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 HSP90AB4PQ58FF6 505 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-218ENST00000617172 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
TARDBP-218ENST00000617172 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
TARDBP-218ENST00000617172 PICK1Q9NRD5 415 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 KCNH4Q9UQ05 1017 aa11.87□□□□□ -0.51
TARDBP-218ENST00000617172 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 CTNND1O60716 968 aaKnown RBP11.86□□□□□ -0.51
TARDBP-218ENST00000617172 GNRH1P01148 92 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 PLCG2P16885 1265 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 CEP85Q6P2H3 762 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 PI16Q6UXB8 463 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 ANKRD23Q86SG2 305 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 SCYL3Q8IZE3 742 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
TARDBP-218ENST00000617172 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-218ENST00000617172 SOX10P56693 466 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 PICALMQ13492 652 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-218ENST00000617172 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-218ENST00000617172 SH3BP5LQ7L8J4 393 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 FASTKD5Q7L8L6 764 aaKnown RBP11.85□□□□□ -0.51
TARDBP-218ENST00000617172 PANK1Q8TE04 598 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 ZNF384Q8TF68 577 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
TARDBP-218ENST00000617172 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 ZHX2Q9Y6X8 837 aa11.85□□□□□ -0.51
TARDBP-218ENST00000617172 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 ATRNL1Q5VV63 1379 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 PDHXO00330 501 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 HMMRO75330 724 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 PTPRAP18433 802 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 PPP4CP60510 307 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 RPAP2Q8IXW5 612 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-218ENST00000617172 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
TARDBP-218ENST00000617172 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
TARDBP-218ENST00000617172 LAMB1P07942 1786 aa11.83□□□□□ -0.52
TARDBP-218ENST00000617172 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 PRMT2P55345 433 aa11.83□□□□□ -0.52
TARDBP-218ENST00000617172 LACTBP83111 547 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
TARDBP-218ENST00000617172 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
TARDBP-218ENST00000617172 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 PI4KBQ9UBF8 816 aa11.83□□□□□ -0.52
TARDBP-218ENST00000617172 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
TARDBP-218ENST00000617172 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 HOXD10P28358 340 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 ZAP70P43403 619 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 MOGSQ13724 837 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 ARMC5Q96C12 935 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 AATFQ9NY61 560 aaKnown RBP eCLIP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
TARDBP-218ENST00000617172 COL2A1P02458 1487 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-218ENST00000617172 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
TARDBP-218ENST00000617172 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-218ENST00000617172 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
TARDBP-218ENST00000617172 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-218ENST00000617172 KIF1BPQ96EK5 621 aa11.81□□□□□ -0.52
TARDBP-218ENST00000617172 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
TARDBP-218ENST00000617172 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
TARDBP-218ENST00000617172 EXOC6BQ9Y2D4 811 aa11.81□□□□□ -0.52
TARDBP-218ENST00000617172 CAP2P40123 477 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 MAP3K12Q12852 859 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 TTF1Q15361 905 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-218ENST00000617172 SLC9C1Q4G0N8 1177 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 GPAT2Q6NUI2 795 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 AACSQ86V21 672 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 RHPN1Q8TCX5 695 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
TARDBP-218ENST00000617172 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms