RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
SREK1-216ENST00000612404 ARPP21Q9UBL0 812 aaPredicted RBP20.81■□□□□ 0.92
SREK1-216ENST00000612404 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
SREK1-216ENST00000612404 SAP30BPQ9UHR5 308 aaKnown RBP20.81■□□□□ 0.92
SREK1-216ENST00000612404 FLT1P17948 1338 aa20.81■□□□□ 0.92
SREK1-216ENST00000612404 BECN1Q14457 450 aa20.81■□□□□ 0.92
SREK1-216ENST00000612404 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
SREK1-216ENST00000612404 PRMT6Q96LA8 375 aaPredicted RBP20.81■□□□□ 0.92
SREK1-216ENST00000612404 NAV1Q8NEY1 1877 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 CD2BP2O95400 341 aaKnown RBP20.8■□□□□ 0.92
SREK1-216ENST00000612404 COL9A3Q14050 684 aaPredicted RBP20.8■□□□□ 0.92
SREK1-216ENST00000612404 HSCBQ8IWL3 235 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
SREK1-216ENST00000612404 TDRD3Q9H7E2 651 aaKnown RBP20.8■□□□□ 0.92
SREK1-216ENST00000612404 SPDYE2BA6NHP3 402 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
SREK1-216ENST00000612404 SPDYE6P0CI01 402 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 CYP2D6P10635 497 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 CACNB3P54284 484 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 TRDNQ13061 729 aa20.8■□□□□ 0.92
SREK1-216ENST00000612404 SMIM22K7EJ46 135 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
SREK1-216ENST00000612404 RALYLQ86SE5 291 aaKnown RBP20.79■□□□□ 0.92
SREK1-216ENST00000612404 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 MYOZ2Q9NPC6 264 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 PDRG1Q9NUG6 133 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
SREK1-216ENST00000612404 ECM29Q5VYK3 1845 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 TIAM2Q8IVF5 1701 aa20.79■□□□□ 0.92
SREK1-216ENST00000612404 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
SREK1-216ENST00000612404 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 SBK1Q52WX2 424 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 AKNAD1Q5T1N1 836 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 GPC2Q8N158 579 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 NCOA7Q8NI08 942 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 DPF2Q92785 391 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 SNX21Q969T3 373 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 DDX4Q9NQI0 724 aaKnown RBP20.78■□□□□ 0.92
SREK1-216ENST00000612404 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 ANAPC4Q9UJX5 808 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 EVX2Q03828 476 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 NFIAQ12857 509 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
SREK1-216ENST00000612404 CNOT7Q9UIV1 285 aaKnown RBP20.78■□□□□ 0.92
SREK1-216ENST00000612404 FOCADQ5VW36 1801 aa20.77■□□□□ 0.92
SREK1-216ENST00000612404 NOL8Q76FK4 1167 aaKnown RBP20.77■□□□□ 0.92
SREK1-216ENST00000612404 STAG1Q8WVM7 1258 aa20.77■□□□□ 0.92
SREK1-216ENST00000612404 RNF41Q9H4P4 317 aaPredicted RBP20.77■□□□□ 0.92
SREK1-216ENST00000612404 NEDD4P46934 1319 aa20.77■□□□□ 0.92
SREK1-216ENST00000612404 SLC3A2P08195 630 aaKnown RBP20.77■□□□□ 0.91
SREK1-216ENST00000612404 SLC4A3P48751 1232 aa20.77■□□□□ 0.91
SREK1-216ENST00000612404 MMP14P50281 582 aa20.77■□□□□ 0.91
SREK1-216ENST00000612404 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.91
SREK1-216ENST00000612404 RBM26Q5T8P6 1007 aaKnown RBP20.77■□□□□ 0.91
SREK1-216ENST00000612404 C12orf60Q5U649 245 aa20.77■□□□□ 0.91
SREK1-216ENST00000612404 LAMB1P07942 1786 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 MYH1P12882 1939 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 ZNF280AP59817 542 aaPredicted RBP20.76■□□□□ 0.91
SREK1-216ENST00000612404 DHX32Q7L7V1 743 aaKnown RBP20.76■□□□□ 0.91
SREK1-216ENST00000612404 MTMR14Q8NCE2 650 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 TTC14Q96N46 770 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 TMOD2Q9NZR1 351 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 TACC3Q9Y6A5 838 aa20.76■□□□□ 0.91
SREK1-216ENST00000612404 CLRN2A0PK11 232 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 TCP10Q12799 353 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 CNNM2Q9H8M5 875 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 B4E1Z4 1266 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 MYO1BO43795 1136 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 PLCD1P51178 756 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 AK2P54819 239 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 IL27Q8NEV9 243 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 KRT23Q9C075 422 aa20.75■□□□□ 0.91
SREK1-216ENST00000612404 OSBPL5Q9H0X9 879 aaPredicted RBP20.75■□□□□ 0.91
SREK1-216ENST00000612404 WNT10BO00744 389 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 DDNO94850 711 aaPredicted RBP20.74■□□□□ 0.91
SREK1-216ENST00000612404 NBPF9Q3BBW0 867 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 SAMD7Q7Z3H4 446 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 MB21D2Q8IYB1 491 aaPredicted RBP20.74■□□□□ 0.91
SREK1-216ENST00000612404 LRRC2Q9BYS8 371 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 ZNF70Q9UC06 446 aaPredicted RBP20.74■□□□□ 0.91
SREK1-216ENST00000612404 DDX60LQ5H9U9 1706 aaKnown RBP20.74■□□□□ 0.91
SREK1-216ENST00000612404 H7C1D1 291 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 MCM5P33992 734 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 FGD1P98174 961 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
SREK1-216ENST00000612404 DYNLL2Q96FJ2 89 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 FAM198AQ9UFP1 575 aa20.74■□□□□ 0.91
SREK1-216ENST00000612404 K7ELQ4 463 aaPredicted RBP20.73■□□□□ 0.91
SREK1-216ENST00000612404 PRDM1O75626 825 aa20.73■□□□□ 0.91
SREK1-216ENST00000612404 EGFRP00533 1210 aa20.73■□□□□ 0.91
SREK1-216ENST00000612404 PDE4BQ07343 736 aa20.73■□□□□ 0.91
SREK1-216ENST00000612404 ZFPM1Q8IX07 1006 aa20.73■□□□□ 0.91
SREK1-216ENST00000612404 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms