RNA–Protein interactions for RNA: ENST00000610976.1

U1.40-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.40-201ENST00000610976 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
U1.40-201ENST00000610976 LIMCH1Q9UPQ0 1083 aa10.47□□□□□ -0.73
U1.40-201ENST00000610976 MINDY4BA8MYZ0 360 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 USP17L21D6R901 530 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
U1.40-201ENST00000610976 PDE4BQ07343 736 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
U1.40-201ENST00000610976 TTC6Q86TZ1 520 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 MTMR14Q8NCE2 650 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 ESR2Q92731 530 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 DPF2Q92785 391 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 TMEM87BQ96K49 555 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 TMOD2Q9NZR1 351 aa10.46□□□□□ -0.73
U1.40-201ENST00000610976 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
U1.40-201ENST00000610976 CHD4Q14839 1912 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 MYO1BO43795 1136 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 GRIN3BO60391 1043 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 FGRP09769 529 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 AK2P54819 239 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
U1.40-201ENST00000610976 RASSF7Q02833 373 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 SART3Q15020 963 aaKnown RBP10.45□□□□□ -0.74
U1.40-201ENST00000610976 DLGAP5Q15398 846 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 CDC42EP5Q6NZY7 148 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 MB21D2Q8IYB1 491 aaPredicted RBP10.45□□□□□ -0.74
U1.40-201ENST00000610976 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 IDI2Q9BXS1 227 aa10.45□□□□□ -0.74
U1.40-201ENST00000610976 DHX36Q9H2U1 1008 aaKnown RBP10.45□□□□□ -0.74
U1.40-201ENST00000610976 PSME4Q14997 1843 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 FLT1P17948 1338 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 ORC4O43929 436 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 HLA-DOAP06340 250 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 CCDC178Q5BJE1 867 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 FKBP1CQ5VVH2 108 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 TBC1D10CQ8IV04 446 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 INTS4Q96HW7 963 aaKnown RBP10.44□□□□□ -0.74
U1.40-201ENST00000610976 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 AGXT2Q9BYV1 514 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
U1.40-201ENST00000610976 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 TAF6LQ9Y6J9 622 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 MYH2Q9UKX2 1941 aa10.44□□□□□ -0.74
U1.40-201ENST00000610976 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 ERICH2A1L162 156 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 PRC1O43663 620 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 ENTPD3O75355 529 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 WDHD1O75717 1129 aaPredicted RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 CD2BP2O95400 341 aaKnown RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 ZNF280AP59817 542 aaPredicted RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 Q6ZUG5 572 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 IQCA1Q86XH1 822 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 GPC2Q8N158 579 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 OSBPL5Q9H0X9 879 aaPredicted RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 SWAP70Q9UH65 585 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.43□□□□□ -0.74
U1.40-201ENST00000610976 TIAM2Q8IVF5 1701 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 COL4A5P29400 1685 aa10.43□□□□□ -0.74
U1.40-201ENST00000610976 LAMA4Q16363 1823 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 ZC3H4Q9UPT8 1303 aaKnown RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 B4E1Z4 1266 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 H7C1D1 291 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 KDM4AO75164 1064 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 CPA1P15085 419 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 LIFRP42702 1097 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 CUL4AQ13619 759 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 GPR162Q16538 588 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 RRP12Q5JTH9 1297 aaKnown RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 ZNF444Q8N0Y2 327 aaPredicted RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 ZNF274Q96GC6 653 aaPredicted RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 PRMT6Q96LA8 375 aaPredicted RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 EHD4Q9H223 541 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 ZSWIM5Q9P217 1185 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.42□□□□□ -0.74
U1.40-201ENST00000610976 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
U1.40-201ENST00000610976 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
U1.40-201ENST00000610976 NEDD4P46934 1319 aa10.41□□□□□ -0.74
U1.40-201ENST00000610976 IFIT3O14879 490 aaKnown RBP10.41□□□□□ -0.74
U1.40-201ENST00000610976 DHX16O60231 1041 aaKnown RBP10.41□□□□□ -0.74
U1.40-201ENST00000610976 YBX3P16989 372 aaKnown RBP eCLIP10.41□□□□□ -0.74
U1.40-201ENST00000610976 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
U1.40-201ENST00000610976 TNNI2P48788 182 aa10.41□□□□□ -0.74
U1.40-201ENST00000610976 PRELPP51888 382 aa10.41□□□□□ -0.74
U1.40-201ENST00000610976 EVCP57679 992 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms