RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 IFIT2P09913 472 aaKnown RBP23.55■■□□□ 1.36
TCF3-219ENST00000610756 NOM1Q5C9Z4 860 aaKnown RBP23.55■■□□□ 1.36
TCF3-219ENST00000610756 ERO1BQ86YB8 467 aa23.55■■□□□ 1.36
TCF3-219ENST00000610756 CNKSR2Q8WXI2 1034 aa23.55■■□□□ 1.36
TCF3-219ENST00000610756 MS4A4AQ96JQ5 239 aa23.55■■□□□ 1.36
TCF3-219ENST00000610756 SNCAIPQ9Y6H5 919 aa23.55■■□□□ 1.36
TCF3-219ENST00000610756 DDTLA6NHG4 134 aaPredicted RBP23.54■■□□□ 1.36
TCF3-219ENST00000610756 PICALMQ13492 652 aa23.54■■□□□ 1.36
TCF3-219ENST00000610756 TMED8Q6PL24 325 aaPredicted RBP23.54■■□□□ 1.36
TCF3-219ENST00000610756 ZSCAN29Q8IWY8 852 aaPredicted RBP23.54■■□□□ 1.36
TCF3-219ENST00000610756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.54■■□□□ 1.36
TCF3-219ENST00000610756 NOL10Q9BSC4 688 aaKnown RBP23.54■■□□□ 1.36
TCF3-219ENST00000610756 PLCG2P16885 1265 aa23.53■■□□□ 1.36
TCF3-219ENST00000610756 INPP5BP32019 993 aa23.53■■□□□ 1.36
TCF3-219ENST00000610756 GTF2A2P52657 109 aa23.53■■□□□ 1.36
TCF3-219ENST00000610756 OTUD7BQ6GQQ9 843 aa23.53■■□□□ 1.36
TCF3-219ENST00000610756 AKAP11Q9UKA4 1901 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 ATRNL1Q5VV63 1379 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 IGF2BP3O00425 579 aaKnown RBP eCLIP23.52■■□□□ 1.36
TCF3-219ENST00000610756 OTUD5Q96G74 571 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 PTPN18Q99952 460 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 LRRCC1Q9C099 1032 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 ANTXR1Q9H6X2 564 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 DCTPP1Q9H773 170 aa23.52■■□□□ 1.36
TCF3-219ENST00000610756 PHF20L1A8MW92 1017 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 IDH1O75874 414 aaKnown RBP23.51■■□□□ 1.35
TCF3-219ENST00000610756 PPATQ06203 517 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 MAP3K12Q12852 859 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 ADGRA1Q86SQ6 560 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 TEX11Q8IYF3 940 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 SH3RF3Q8TEJ3 882 aaPredicted RBP23.51■■□□□ 1.35
TCF3-219ENST00000610756 AATFQ9NY61 560 aaKnown RBP eCLIP23.51■■□□□ 1.35
TCF3-219ENST00000610756 NDUFB9Q9Y6M9 179 aa23.51■■□□□ 1.35
TCF3-219ENST00000610756 GPR25O00155 361 aa23.5■■□□□ 1.35
TCF3-219ENST00000610756 TBC1D12O60347 775 aa23.5■■□□□ 1.35
TCF3-219ENST00000610756 CYP7A1P22680 504 aa23.5■■□□□ 1.35
TCF3-219ENST00000610756 PPIL2Q13356 520 aa23.5■■□□□ 1.35
TCF3-219ENST00000610756 TTF1Q15361 905 aaPredicted RBP23.5■■□□□ 1.35
TCF3-219ENST00000610756 NOL9Q5SY16 702 aaKnown RBP23.5■■□□□ 1.35
TCF3-219ENST00000610756 IRF6O14896 467 aa23.49■■□□□ 1.35
TCF3-219ENST00000610756 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
TCF3-219ENST00000610756 R3HDMLQ9H3Y0 253 aa23.49■■□□□ 1.35
TCF3-219ENST00000610756 ATP5JP18859 108 aa23.48■■□□□ 1.35
TCF3-219ENST00000610756 CERS3Q8IU89 383 aa23.48■■□□□ 1.35
TCF3-219ENST00000610756 ZNF296Q8WUU4 475 aaPredicted RBP23.48■■□□□ 1.35
TCF3-219ENST00000610756 BRI3BPQ8WY22 251 aa23.48■■□□□ 1.35
TCF3-219ENST00000610756 PCDHB15Q9Y5E8 787 aa23.48■■□□□ 1.35
TCF3-219ENST00000610756 CASP8AP2Q9UKL3 1982 aa23.48■■□□□ 1.35
TCF3-219ENST00000610756 CCL15-CCL14A0A0B4J2E2 113 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 CETPP11597 493 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 CCL15Q16663 113 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 MAGEB6Q8N7X4 407 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 MCOLN1Q9GZU1 580 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 BCL11AQ9H165 835 aa23.47■■□□□ 1.35
TCF3-219ENST00000610756 DHX36Q9H2U1 1008 aaKnown RBP23.47■■□□□ 1.35
TCF3-219ENST00000610756 CTNND1O60716 968 aaKnown RBP23.46■■□□□ 1.35
TCF3-219ENST00000610756 DGKZQ13574 1117 aa23.46■■□□□ 1.35
TCF3-219ENST00000610756 TGFBRAP1Q8WUH2 860 aa23.46■■□□□ 1.35
TCF3-219ENST00000610756 ABHD8Q96I13 439 aa23.46■■□□□ 1.35
TCF3-219ENST00000610756 OTOFQ9HC10 1997 aa23.46■■□□□ 1.35
TCF3-219ENST00000610756 COL2A1P02458 1487 aaPredicted RBP23.46■■□□□ 1.35
TCF3-219ENST00000610756 PI4KBQ9UBF8 816 aa23.45■■□□□ 1.34
TCF3-219ENST00000610756 GOLIM4O00461 696 aa23.44■■□□□ 1.34
TCF3-219ENST00000610756 SMARCA5O60264 1052 aaPredicted RBP23.44■■□□□ 1.34
TCF3-219ENST00000610756 FKTNO75072 461 aa23.44■■□□□ 1.34
TCF3-219ENST00000610756 DYNLL1P63167 89 aaKnown RBP23.44■■□□□ 1.34
TCF3-219ENST00000610756 SCYL3Q8IZE3 742 aa23.44■■□□□ 1.34
TCF3-219ENST00000610756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.44■■□□□ 1.346e-6■■■□□ 15.9
TCF3-219ENST00000610756 KCNH4Q9UQ05 1017 aa23.44■■□□□ 1.34
TCF3-219ENST00000610756 SLURP2P0DP57 97 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 CRHR2Q13324 411 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 SLC9C2Q5TAH2 1124 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 CTU1Q7Z7A3 348 aaKnown RBP23.43■■□□□ 1.34
TCF3-219ENST00000610756 DNAJC2Q99543 621 aaKnown RBP23.43■■□□□ 1.34
TCF3-219ENST00000610756 BOLA2Q9H3K6 86 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 ZCCHC17Q9NP64 241 aaKnown RBP23.43■■□□□ 1.34
TCF3-219ENST00000610756 PICK1Q9NRD5 415 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
TCF3-219ENST00000610756 AK9Q5TCS8 1911 aa23.43■■□□□ 1.34
TCF3-219ENST00000610756 CXCL11O14625 94 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 CAPN15O75808 1086 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 PTPRAP18433 802 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 FOXP4Q8IVH2 680 aaPredicted RBP23.42■■□□□ 1.34
TCF3-219ENST00000610756 MAPKAPK5Q8IW41 473 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 MIGA1Q8NAN2 632 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 CRBNQ96SW2 442 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 HAUS7Q99871 368 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 PAG1Q9NWQ8 432 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 ZHX2Q9Y6X8 837 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 LAMB1P07942 1786 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 FLT1P17948 1338 aa23.42■■□□□ 1.34
TCF3-219ENST00000610756 METTL16Q86W50 562 aaKnown RBP23.41■■□□□ 1.34
TCF3-219ENST00000610756 BTBD19C9JJ37 291 aa23.4■■□□□ 1.34
TCF3-219ENST00000610756 PDE6AP16499 860 aa23.4■■□□□ 1.34
TCF3-219ENST00000610756 AAMPQ13685 434 aa23.4■■□□□ 1.34
TCF3-219ENST00000610756 PKN2Q16513 984 aaKnown RBP23.4■■□□□ 1.34
TCF3-219ENST00000610756 ZFYVE28Q9HCC9 887 aa23.4■■□□□ 1.34
TCF3-219ENST00000610756 PALD1Q9ULE6 856 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms