RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NR1I2O75469 434 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 IFNAR1P17181 557 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 MSNP26038 577 aaKnown RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 GUCY1B3Q02153 619 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 GRAPQ13588 217 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 TRIM29Q14134 588 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 WTAPQ15007 396 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 NTRK3Q16288 839 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 MYSM1Q5VVJ2 828 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 ADALQ6DHV7 355 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 FGRP09769 529 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 ME1P48163 572 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 FOSBP53539 338 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 TYRO3Q06418 890 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 NFIXQ14938 502 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
USP6NL-206ENST00000609853 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
USP6NL-206ENST00000609853 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
USP6NL-206ENST00000609853 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
USP6NL-206ENST00000609853 FAM182BQ5T319 152 aa13.89□□□□□ -0.19
USP6NL-206ENST00000609853 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
USP6NL-206ENST00000609853 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
USP6NL-206ENST00000609853 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
USP6NL-206ENST00000609853 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
USP6NL-206ENST00000609853 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
USP6NL-206ENST00000609853 TNRC6CQ9HCJ0 1690 aaKnown RBP13.89□□□□□ -0.19
USP6NL-206ENST00000609853 IRS2Q9Y4H2 1338 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
USP6NL-206ENST00000609853 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
USP6NL-206ENST00000609853 CDC27P30260 824 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 STK38Q15208 465 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
USP6NL-206ENST00000609853 CAMK4Q16566 473 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 RTN1Q16799 776 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 SMIM5Q71RC9 77 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
USP6NL-206ENST00000609853 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
USP6NL-206ENST00000609853 XDHP47989 1333 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 ECM29Q5VYK3 1845 aa13.88□□□□□ -0.19
USP6NL-206ENST00000609853 BAZ2AQ9UIF9 1905 aaKnown RBP13.87□□□□□ -0.19
USP6NL-206ENST00000609853 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP6NL-206ENST00000609853 MECOMQ03112 1051 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
USP6NL-206ENST00000609853 KRT40Q6A162 431 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 ENGASEQ8NFI3 743 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 NKX2-3Q8TAU0 364 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 LAMB1P07942 1786 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.87□□□□□ -0.19
USP6NL-206ENST00000609853 SPTLC2O15270 562 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 CALM1P0DP23 149 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 CALM2P0DP24 149 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 CALM3P0DP25 149 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 ST5P78524 1137 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
USP6NL-206ENST00000609853 SBK1Q52WX2 424 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 ANO1Q5XXA6 986 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 IQCA1Q86XH1 822 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 INCENPQ9NQS7 918 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 ZKSCAN5Q9Y2L8 839 aa13.87□□□□□ -0.19
USP6NL-206ENST00000609853 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ORC4O43929 436 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 DEXIO95424 95 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ADCY5O95622 1261 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 GSTO1P78417 241 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 SLC39A14Q15043 492 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP6NL-206ENST00000609853 SEC23AQ15436 765 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 OTUD7BQ6GQQ9 843 aa13.86□□□□□ -0.19
USP6NL-206ENST00000609853 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms