RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 IFRD2Q12894 506 aaPredicted RBP7.35□□□□□ -1.23
LINC00397-202ENST00000606785 RASGRF1Q13972 1273 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 FXNQ16595 210 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 PTPROQ16827 1216 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 PLEKHG4Q58EX7 1191 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 RNF187Q5TA31 235 aaPredicted RBP7.35□□□□□ -1.23
LINC00397-202ENST00000606785 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 SH3TC2Q8TF17 1288 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 GPATCH3Q96I76 525 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 DNAJC7Q99615 494 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 MDFIQ99750 246 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
LINC00397-202ENST00000606785 POLR3KQ9Y2Y1 108 aaPredicted RBP7.35□□□□□ -1.23
LINC00397-202ENST00000606785 H3BRJ5 948 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 SOX1O00570 391 aaPredicted RBP7.34□□□□□ -1.23
LINC00397-202ENST00000606785 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
LINC00397-202ENST00000606785 MX2P20592 715 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 EPHA1P21709 976 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 MAP1SQ66K74 1059 aaPredicted RBP7.34□□□□□ -1.23
LINC00397-202ENST00000606785 C19orf47Q8N9M1 422 aaKnown RBP7.34□□□□□ -1.23
LINC00397-202ENST00000606785 KCNB2Q92953 911 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 TNKS2Q9H2K2 1166 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 SOX17Q9H6I2 414 aaPredicted RBP7.34□□□□□ -1.23
LINC00397-202ENST00000606785 CACNA2D2Q9NY47 1150 aa7.34□□□□□ -1.23
LINC00397-202ENST00000606785 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
LINC00397-202ENST00000606785 CDC45O75419 566 aa7.33□□□□□ -1.24
LINC00397-202ENST00000606785 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
LINC00397-202ENST00000606785 LARP1BQ659C4 914 aaKnown RBP7.33□□□□□ -1.24
LINC00397-202ENST00000606785 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
LINC00397-202ENST00000606785 PSAPL1Q6NUJ1 521 aa7.33□□□□□ -1.24
LINC00397-202ENST00000606785 MPRIPQ6WCQ1 1025 aa7.33□□□□□ -1.24
LINC00397-202ENST00000606785 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.33□□□□□ -1.24
LINC00397-202ENST00000606785 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
LINC00397-202ENST00000606785 BRINP2Q9C0B6 783 aa7.33□□□□□ -1.24
LINC00397-202ENST00000606785 GRIN3BO60391 1043 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 PPP2R5EQ16537 467 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 MICAL1Q8TDZ2 1067 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 APPBP2Q92624 585 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 FANCLQ9NW38 375 aa7.32□□□□□ -1.24
LINC00397-202ENST00000606785 PRR36Q9H6K5 1346 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 hCG_2014768A0A024R1R8 64 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ELOA3DA6NLF2 546 aaPredicted RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 MEIS3P2A8K0S8 358 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 GJB6O95452 261 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 IBSPP21815 317 aaPredicted RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 COL8A1P27658 744 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 MAP2K3P46734 347 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 GSTM4Q03013 218 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 LRRFIP1Q32MZ4 808 aaKnown RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ELOA3BQ3SY89 546 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 HOMER1Q86YM7 354 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ELOA3Q8NG57 546 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ZCRB1Q8TBF4 217 aaKnown RBP7.31□□□□□ -1.24
LINC00397-202ENST00000606785 TM9SF2Q99805 663 aa7.31□□□□□ -1.24
LINC00397-202ENST00000606785 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 GFRA2O00451 464 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 CYP11A1P05108 521 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 SELPP16109 830 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 IGBP1P78318 339 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 RUFY4Q6ZNE9 571 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 GPBAR1Q8TDU6 330 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 WNT8BQ93098 351 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 ACSBG1Q96GR2 724 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 SLKQ9H2G2 1235 aaPredicted RBP7.3□□□□□ -1.24
LINC00397-202ENST00000606785 TMEM260Q9NX78 707 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 PCDHA4Q9UN74 947 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 PRKAB1Q9Y478 270 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 PPME1Q9Y570 386 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 SNCAIPQ9Y6H5 919 aa7.3□□□□□ -1.24
LINC00397-202ENST00000606785 A0A1W2PQH9 124 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 NEURL1BA8MQ27 555 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 DDAH1O94760 285 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 HTR3BO95264 441 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 GUCY2CP25092 1073 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 CDK8P49336 464 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 ARL4DP49703 201 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 PIP4K2BP78356 416 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 C19orf57Q0VDD7 668 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 MTERF2Q49AM1 385 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 WIPI1Q5MNZ9 446 aaPredicted RBP7.29□□□□□ -1.24
LINC00397-202ENST00000606785 HGSNATQ68CP4 663 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 TTC6Q86TZ1 520 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 TAB3Q8N5C8 712 aaPredicted RBP7.29□□□□□ -1.24
LINC00397-202ENST00000606785 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 TMEM40Q8WWA1 233 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 SLC7A3Q8WY07 619 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 CORO1BQ9BR76 489 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
LINC00397-202ENST00000606785 NRSN2Q9GZP1 204 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 TMX1Q9H3N1 280 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 ANTXR1Q9H6X2 564 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 KRT82Q9NSB4 513 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
LINC00397-202ENST00000606785 NOP58Q9Y2X3 529 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms