RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MYH2Q9UKX2 1941 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 APOBRQ0VD83 1088 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 CYB5R4Q7L1T6 521 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 CHMP4CQ96CF2 233 aa20.81■□□□□ 0.92
SHKBP1-224ENST00000600718 F8W031 263 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-224ENST00000600718 SLC3A2P08195 630 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-224ENST00000600718 ST3GAL1Q11201 340 aa20.8■□□□□ 0.92
SHKBP1-224ENST00000600718 MCM9Q9NXL9 1143 aa20.8■□□□□ 0.92
SHKBP1-224ENST00000600718 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
SHKBP1-224ENST00000600718 PFKFB2O60825 505 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 FGRP09769 529 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 RHBDL3P58872 404 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 HDLBPQ00341 1268 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 TEX11Q8IYF3 940 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 TGFBRAP1Q8WUH2 860 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 MTA3Q9BTC8 594 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 KDM4AO75164 1064 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 AMOTL1Q8IY63 956 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 KLHL34Q8N239 644 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 TEKT1Q969V4 418 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 ZNF277Q9NRM2 450 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 TOMM22Q9NS69 142 aa20.79■□□□□ 0.92
SHKBP1-224ENST00000600718 CYP2D7A0A087X1C5 515 aa20.78■□□□□ 0.92
SHKBP1-224ENST00000600718 STK3Q13188 491 aa20.78■□□□□ 0.92
SHKBP1-224ENST00000600718 ESR2Q92731 530 aa20.78■□□□□ 0.92
SHKBP1-224ENST00000600718 ANGEL1Q9UNK9 670 aaKnown RBP20.78■□□□□ 0.92
SHKBP1-224ENST00000600718 YDJCA8MPS7 323 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 C12orf60Q5U649 245 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 NKX2-3Q8TAU0 364 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 IGDCC4Q8TDY8 1250 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 GPHNQ9NQX3 736 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 SH2B2O14492 632 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 USP17L8P0C7I0 530 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 SCNN1DP51172 638 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 SPON1Q9HCB6 807 aa20.77■□□□□ 0.92
SHKBP1-224ENST00000600718 NT5C2P49902 561 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 ORC4O43929 436 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 IARSP41252 1262 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 LIFRP42702 1097 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 CRKP46108 304 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 PDE4BQ07343 736 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 SART3Q15020 963 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 TMEM67Q5HYA8 995 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 MAPKAPK5Q8IW41 473 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 TNPO1Q92973 898 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 ZDHHC15Q96MV8 337 aa20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 LLPHQ9BRT6 129 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHKBP1-224ENST00000600718 SMIM22K7EJ46 135 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 IFIT3O14879 490 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 CYP2D6P10635 497 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 GJB2P29033 226 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 SCRN1Q12765 414 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 NIM1KQ8IY84 436 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 BRPF3Q9ULD4 1205 aa20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 NAP1L2Q9ULW6 460 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 BAZ2AQ9UIF9 1905 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-224ENST00000600718 KLF18A0A0U1RQI7 1052 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 PDIA4P13667 645 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 SGMS1Q86VZ5 419 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 TMTC2Q8N394 836 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 MYO3BQ8WXR4 1341 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 USP40Q9NVE5 1235 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 SERPINA10Q9UK55 444 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 ZNRF3Q9ULT6 936 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 BCS1LQ9Y276 419 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 SCN9AQ15858 1988 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 FLT1P17948 1338 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 ERICH2A1L162 156 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 POLR3DP05423 398 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 APOBEC3HQ6NTF7 200 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 LY9Q9HBG7 655 aa20.74■□□□□ 0.91
SHKBP1-224ENST00000600718 VIL1P09327 827 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-224ENST00000600718 PKP1Q13835 747 aa20.73■□□□□ 0.91
SHKBP1-224ENST00000600718 ZDHHC9Q9Y397 364 aa20.73■□□□□ 0.91
SHKBP1-224ENST00000600718 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 BRD1O95696 1058 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 RSBN1LQ6PCB5 846 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 UBAC1Q9BSL1 405 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 ZNF646O15015 1829 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 RANBP6O60518 1105 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 CDC42EP5Q6NZY7 148 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 CLEC17AQ6ZS10 378 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 GBP4Q96PP9 640 aa20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 SAP30BPQ9UHR5 308 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-224ENST00000600718 LAMB1P07942 1786 aa20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 WDR33Q9C0J8 1336 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 GOLGA8BA8MQT2 603 aa20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 DHX16O60231 1041 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms