RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 FAM198AQ9UFP1 575 aa15.69■□□□□ 0.1
SRRM1-223ENST00000600523 CNTNAP1P78357 1384 aa15.69■□□□□ 0.1
SRRM1-223ENST00000600523 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 ADGRA1Q86SQ6 560 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 TICAM2Q86XR7 235 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 TEPSINQ96N21 525 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 CSADQ9Y600 493 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
SRRM1-223ENST00000600523 DOCK2Q92608 1830 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 UBE2Q2LH0YL09 131 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 RNF113AO15541 343 aaKnown RBP15.67■□□□□ 0.1
SRRM1-223ENST00000600523 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 ANKRD13AQ8IZ07 590 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 SLC10A4Q96EP9 437 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 CAPNS2Q96L46 248 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 ZNF341Q9BYN7 854 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 OSBPL5Q9H0X9 879 aaPredicted RBP15.67■□□□□ 0.1
SRRM1-223ENST00000600523 OSBPL3Q9H4L5 887 aa15.67■□□□□ 0.1
SRRM1-223ENST00000600523 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
SRRM1-223ENST00000600523 NOGQ13253 232 aa15.66■□□□□ 0.1
SRRM1-223ENST00000600523 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
SRRM1-223ENST00000600523 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
SRRM1-223ENST00000600523 APPBP2Q92624 585 aa15.66■□□□□ 0.1
SRRM1-223ENST00000600523 WDR33Q9C0J8 1336 aaKnown RBP15.66■□□□□ 0.1
SRRM1-223ENST00000600523 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 MBD4O95243 580 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 MIGA2Q7L4E1 593 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 MAPKAPK5Q8IW41 473 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
SRRM1-223ENST00000600523 RILPL2Q969X0 211 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 PI4KBQ9UBF8 816 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 FLT1P17948 1338 aa15.65■□□□□ 0.1
SRRM1-223ENST00000600523 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
SRRM1-223ENST00000600523 RFX7Q2KHR2 1363 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 USP2O75604 605 aaPredicted RBP15.64■□□□□ 0.09
SRRM1-223ENST00000600523 GNAT2P19087 354 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 MAP2K2P36507 400 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 VEGFBP49765 207 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 MAP3K9P80192 1104 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 MOB2Q70IA6 237 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 TTC6Q86TZ1 520 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 DNAJC5GQ8N7S2 189 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 WRNIP1Q96S55 665 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.09
SRRM1-223ENST00000600523 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
SRRM1-223ENST00000600523 DDX4Q9NQI0 724 aaKnown RBP15.64■□□□□ 0.09
SRRM1-223ENST00000600523 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
SRRM1-223ENST00000600523 AK9Q5TCS8 1911 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 HIP1O00291 1037 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 POLR3DP05423 398 aaPredicted RBP15.63■□□□□ 0.09
SRRM1-223ENST00000600523 LDLRAD1Q5T700 205 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 FOXP4Q8IVH2 680 aaPredicted RBP15.63■□□□□ 0.09
SRRM1-223ENST00000600523 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 ZFPM1Q8IX07 1006 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
SRRM1-223ENST00000600523 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.63■□□□□ 0.091e-6■■■■■ 31.8
SRRM1-223ENST00000600523 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
SRRM1-223ENST00000600523 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
SRRM1-223ENST00000600523 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
SRRM1-223ENST00000600523 DDTLA6NHG4 134 aaPredicted RBP15.62■□□□□ 0.09
SRRM1-223ENST00000600523 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
SRRM1-223ENST00000600523 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 NACAP1Q9BZK3 213 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 MCM9Q9NXL9 1143 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 SAP30BPQ9UHR5 308 aaKnown RBP15.62■□□□□ 0.09
SRRM1-223ENST00000600523 SLC4A4Q9Y6R1 1079 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
SRRM1-223ENST00000600523 TBC1D12O60347 775 aa15.61■□□□□ 0.09
SRRM1-223ENST00000600523 APPP05067 770 aa15.61■□□□□ 0.09
SRRM1-223ENST00000600523 SLC10A3P09131 477 aa15.61■□□□□ 0.09
SRRM1-223ENST00000600523 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
SRRM1-223ENST00000600523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.61■□□□□ 0.09
SRRM1-223ENST00000600523 PUS7LQ9H0K6 701 aaKnown RBP15.61■□□□□ 0.09
SRRM1-223ENST00000600523 PALD1Q9ULE6 856 aa15.61■□□□□ 0.09
SRRM1-223ENST00000600523 FZD1Q9UP38 647 aa15.61■□□□□ 0.09
SRRM1-223ENST00000600523 ZBTB48P10074 688 aaPredicted RBP15.6■□□□□ 0.09
SRRM1-223ENST00000600523 VGLL4Q14135 290 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 SH3BP5LQ7L8J4 393 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 RASAL3Q86YV0 1011 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 ELP3Q9H9T3 547 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 HELLSQ9NRZ9 838 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 DIAPH3Q9NSV4 1193 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 MYH7P12883 1935 aa15.6■□□□□ 0.09
SRRM1-223ENST00000600523 GPAA1O43292 621 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
SRRM1-223ENST00000600523 PDE4AP27815 886 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 SREBF2Q12772 1141 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 ZMYM1Q5SVZ6 1142 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 TTC22Q5TAA0 569 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 GIMAP6Q6P9H5 292 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 ERO1BQ86YB8 467 aa15.59■□□□□ 0.09
SRRM1-223ENST00000600523 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms