RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 ZNF280AP59817 542 aaPredicted RBP19.51■□□□□ 0.71
U2AF1L4-220ENST00000600296 HAND2P61296 217 aa19.51■□□□□ 0.71
U2AF1L4-220ENST00000600296 CFAP100Q494V2 611 aa19.51■□□□□ 0.71
U2AF1L4-220ENST00000600296 CDC42EP5Q6NZY7 148 aa19.51■□□□□ 0.71
U2AF1L4-220ENST00000600296 CTR9Q6PD62 1173 aa19.51■□□□□ 0.71
U2AF1L4-220ENST00000600296 SPDYE2BA6NHP3 402 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 CD2BP2O95400 341 aaKnown RBP19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 USP17L8P0C7I0 530 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 SPDYE6P0CI01 402 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 USP5P45974 858 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 PPARAQ07869 468 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 RUFY3Q7L099 469 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 STAG1Q8WVM7 1258 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 NEK1Q96PY6 1258 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 PCDHAC2Q9Y5I4 1007 aa19.5■□□□□ 0.71
U2AF1L4-220ENST00000600296 GREB1LQ9C091 1923 aaPredicted RBP19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 ST18O60284 1047 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 HMGB1P09429 215 aaKnown RBP19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 FGRP09769 529 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 RPS6KB1P23443 525 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 TGFBRAP1Q8WUH2 860 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 TACC3Q9Y6A5 838 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
U2AF1L4-220ENST00000600296 USP17L12C9JPN9 530 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 USP17L21D6R901 530 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 PCP11498 1178 aaKnown RBP19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 NEK4P51957 841 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 AKNAD1Q5T1N1 836 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 BLOC1S2Q6QNY1 142 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 MB21D2Q8IYB1 491 aaPredicted RBP19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 OGFOD1Q8N543 542 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 TBC1D2Q9BYX2 928 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 USP40Q9NVE5 1235 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 CYP46A1Q9Y6A2 500 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 SCN4AP35499 1836 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 NEDD4P46934 1319 aa19.48■□□□□ 0.71
U2AF1L4-220ENST00000600296 GMPSP49915 693 aaPredicted RBP19.47■□□□□ 0.71
U2AF1L4-220ENST00000600296 C12orf60Q5U649 245 aa19.47■□□□□ 0.71
U2AF1L4-220ENST00000600296 MAPKAPK5Q8IW41 473 aa19.47■□□□□ 0.71
U2AF1L4-220ENST00000600296 GPC2Q8N158 579 aa19.47■□□□□ 0.71
U2AF1L4-220ENST00000600296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.47■□□□□ 0.71
U2AF1L4-220ENST00000600296 MCM2P49736 904 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 NT5C2P49902 561 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 CTDSPL2Q05D32 466 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 BECN1Q14457 450 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 FBXL16Q8N461 479 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 AGXT2Q9BYV1 514 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 OSBPL5Q9H0X9 879 aaPredicted RBP19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
U2AF1L4-220ENST00000600296 ATRNL1Q5VV63 1379 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 CYP2D7A0A087X1C5 515 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 CPA1P15085 419 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 RBM5P52756 815 aaKnown RBP eCLIP19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 SPDYE2Q495Y8 402 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 HSCBQ8IWL3 235 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 CNNM2Q9H8M5 875 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 MYOZ2Q9NPC6 264 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
U2AF1L4-220ENST00000600296 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 SMIM22K7EJ46 135 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 ORC4O43929 436 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 CYP2D6P10635 497 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 EVX2Q03828 476 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 NFIAQ12857 509 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 FKBP1CQ5VVH2 108 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 FAM198AQ9UFP1 575 aa19.44■□□□□ 0.7
U2AF1L4-220ENST00000600296 SHTN1A0MZ66 631 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 K7ELQ4 463 aaPredicted RBP19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 ENTPD3O75355 529 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 AK2P54819 239 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 ANTXR2P58335 489 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 MFSD6Q6ZSS7 791 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 MICALL2Q8IY33 904 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 AMOTL1Q8IY63 956 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 NKX2-3Q8TAU0 364 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 KRT23Q9C075 422 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 TDRD3Q9H7E2 651 aaKnown RBP19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 PDRG1Q9NUG6 133 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 GJA3Q9Y6H8 435 aa19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 POLR2AP24928 1970 aaKnown RBP19.43■□□□□ 0.7
U2AF1L4-220ENST00000600296 WNT10BO00744 389 aa19.42■□□□□ 0.7
U2AF1L4-220ENST00000600296 TRDNQ13061 729 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms