RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SLC9C2Q5TAH2 1124 aa22.79■■□□□ 1.24
CCDC9-205ENST00000600117 TMED8Q6PL24 325 aaPredicted RBP22.79■■□□□ 1.24
CCDC9-205ENST00000600117 ADGRA1Q86SQ6 560 aa22.79■■□□□ 1.24
CCDC9-205ENST00000600117 SLF2Q8IX21 1173 aa22.79■■□□□ 1.24
CCDC9-205ENST00000600117 TRIM6-TRIM34B2RNG4 842 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 CYP7A1P22680 504 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 TM4SF4P48230 202 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 RBM5P52756 815 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC9-205ENST00000600117 SLFNL1Q499Z3 407 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 FSD1Q9BTV5 496 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC9-205ENST00000600117 AK9Q5TCS8 1911 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 ZNF532Q9HCE3 1301 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 ECM29Q5VYK3 1845 aa22.78■■□□□ 1.24
CCDC9-205ENST00000600117 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
CCDC9-205ENST00000600117 GPR25O00155 361 aa22.77■■□□□ 1.24
CCDC9-205ENST00000600117 SDSP20132 328 aa22.77■■□□□ 1.24
CCDC9-205ENST00000600117 UBE3CQ15386 1083 aa22.77■■□□□ 1.24
CCDC9-205ENST00000600117 RILPL2Q969X0 211 aa22.77■■□□□ 1.24
CCDC9-205ENST00000600117 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
CCDC9-205ENST00000600117 ZSCAN25Q6NSZ9 544 aa22.76■■□□□ 1.23
CCDC9-205ENST00000600117 MOB2Q70IA6 237 aa22.76■■□□□ 1.23
CCDC9-205ENST00000600117 UBE2Q2LH0YL09 131 aa22.75■■□□□ 1.23
CCDC9-205ENST00000600117 RNF113AO15541 343 aaKnown RBP22.75■■□□□ 1.23
CCDC9-205ENST00000600117 BTDP43251 543 aa22.75■■□□□ 1.23
CCDC9-205ENST00000600117 KIAA0100Q14667 2235 aaKnown RBP22.74■■□□□ 1.23
CCDC9-205ENST00000600117 ZFYP08048 801 aaPredicted RBP22.74■■□□□ 1.23
CCDC9-205ENST00000600117 PPP4CP60510 307 aa22.74■■□□□ 1.23
CCDC9-205ENST00000600117 BMP2KLQ5H9B9 411 aa22.74■■□□□ 1.23
CCDC9-205ENST00000600117 TICAM2Q86XR7 235 aa22.74■■□□□ 1.23
CCDC9-205ENST00000600117 CFHR5Q9BXR6 569 aa22.74■■□□□ 1.23
CCDC9-205ENST00000600117 TDRD3Q9H7E2 651 aaKnown RBP22.74■■□□□ 1.23
CCDC9-205ENST00000600117 RHBDL3P58872 404 aa22.73■■□□□ 1.23
CCDC9-205ENST00000600117 LRRFIP1Q32MZ4 808 aaKnown RBP22.73■■□□□ 1.23
CCDC9-205ENST00000600117 SPDYE2Q495Y8 402 aa22.73■■□□□ 1.23
CCDC9-205ENST00000600117 CDC42EP5Q6NZY7 148 aa22.73■■□□□ 1.23
CCDC9-205ENST00000600117 ZNF70Q9UC06 446 aaPredicted RBP22.73■■□□□ 1.23
CCDC9-205ENST00000600117 BRCA2P51587 3418 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 CLRN2A0PK11 232 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 FKTNO75072 461 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 DYNLL1P63167 89 aaKnown RBP22.72■■□□□ 1.23
CCDC9-205ENST00000600117 SREBF2Q12772 1141 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 ZMYM1Q5SVZ6 1142 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 MIGA1Q8NAN2 632 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 APPBP2Q92624 585 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 OSBP2Q969R2 916 aa22.72■■□□□ 1.23
CCDC9-205ENST00000600117 RIOK1Q9BRS2 568 aaKnown RBP22.72■■□□□ 1.23
CCDC9-205ENST00000600117 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.23
CCDC9-205ENST00000600117 HABP4Q5JVS0 413 aaKnown RBP22.71■■□□□ 1.23
CCDC9-205ENST00000600117 PUS7LQ9H0K6 701 aaKnown RBP22.71■■□□□ 1.23
CCDC9-205ENST00000600117 USP40Q9NVE5 1235 aa22.71■■□□□ 1.23
CCDC9-205ENST00000600117 MYO1BO43795 1136 aa22.7■■□□□ 1.22
CCDC9-205ENST00000600117 BAG3O95817 575 aa22.7■■□□□ 1.22
CCDC9-205ENST00000600117 TTLL12Q14166 644 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-205ENST00000600117 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
CCDC9-205ENST00000600117 CEP290O15078 2479 aa22.69■■□□□ 1.22
CCDC9-205ENST00000600117 MAGEB6P1A0A0J9YX57 407 aa22.69■■□□□ 1.22
CCDC9-205ENST00000600117 NF2P35240 595 aa22.69■■□□□ 1.22
CCDC9-205ENST00000600117 CACNB3P54284 484 aa22.69■■□□□ 1.22
CCDC9-205ENST00000600117 PRAMEF18Q5VWM3 479 aa22.69■■□□□ 1.22
CCDC9-205ENST00000600117 SH3RF3Q8TEJ3 882 aaPredicted RBP22.69■■□□□ 1.22
CCDC9-205ENST00000600117 NOL10Q9BSC4 688 aaKnown RBP22.69■■□□□ 1.22
CCDC9-205ENST00000600117 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
CCDC9-205ENST00000600117 M0R2C6 588 aa22.68■■□□□ 1.22
CCDC9-205ENST00000600117 WDHD1O75717 1129 aaPredicted RBP22.68■■□□□ 1.22
CCDC9-205ENST00000600117 NMIQ13287 307 aaPredicted RBP22.68■■□□□ 1.22
CCDC9-205ENST00000600117 FKBP1CQ5VVH2 108 aa22.68■■□□□ 1.22
CCDC9-205ENST00000600117 LCORLQ8N3X6 602 aa22.68■■□□□ 1.22
CCDC9-205ENST00000600117 FAM227BQ96M60 508 aa22.68■■□□□ 1.22
CCDC9-205ENST00000600117 SEC62Q99442 399 aaKnown RBP22.68■■□□□ 1.22
CCDC9-205ENST00000600117 A0A0D9SFI3 127 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 MBD4O95243 580 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 PLCG2P16885 1265 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 NFIAQ12857 509 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 MKRN3Q13064 507 aaKnown RBP22.67■■□□□ 1.22
CCDC9-205ENST00000600117 CERS3Q8IU89 383 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 APOBEC3FQ8IUX4 373 aaKnown RBP22.67■■□□□ 1.22
CCDC9-205ENST00000600117 IDI2Q9BXS1 227 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 R3HDMLQ9H3Y0 253 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 ARMT1Q9H993 441 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
CCDC9-205ENST00000600117 FOCADQ5VW36 1801 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 HIP1O00291 1037 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 CHMLP26374 656 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 TEX11Q8IYF3 940 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 DDX4Q9NQI0 724 aaKnown RBP22.66■■□□□ 1.22
CCDC9-205ENST00000600117 HELLSQ9NRZ9 838 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 FAM198AQ9UFP1 575 aa22.66■■□□□ 1.22
CCDC9-205ENST00000600117 RBBP6Q7Z6E9 1792 aaKnown RBP22.66■■□□□ 1.22
CCDC9-205ENST00000600117 TCP10L2B9ZVM9 353 aa22.65■■□□□ 1.22
CCDC9-205ENST00000600117 ALDH1A1P00352 501 aa22.65■■□□□ 1.22
CCDC9-205ENST00000600117 STRBPQ96SI9 672 aaKnown RBP22.65■■□□□ 1.22
CCDC9-205ENST00000600117 DIAPH3Q9NSV4 1193 aa22.65■■□□□ 1.22
CCDC9-205ENST00000600117 GPAA1O43292 621 aa22.64■■□□□ 1.21
CCDC9-205ENST00000600117 NPM3O75607 178 aaKnown RBP22.64■■□□□ 1.21
CCDC9-205ENST00000600117 CCDC129Q6ZRS4 1044 aa22.63■■□□□ 1.21
CCDC9-205ENST00000600117 ARMC9Q7Z3E5 817 aa22.63■■□□□ 1.21
CCDC9-205ENST00000600117 FAM83AQ86UY5 434 aa22.63■■□□□ 1.21
CCDC9-205ENST00000600117 PRKAB2O43741 272 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms