RNA–Protein interactions for RNA: ENST00000599909.1

RPS5-208, Transcript of ribosomal protein S5, human

TSL 2

Gene RPS5, Length 523 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS5-208	ENST00000599909	FXR1	P51114	621 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	TIMM10	P62072	90 aa		13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	DZIP1	Q86YF9	867 aa	Known RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	SCYL3	Q8IZE3	742 aa		13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	ZGPAT	Q8N5A5	531 aa	Known RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	RAET1E	Q8TD07	263 aa		13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	API5	Q9BZZ5	524 aa	Known RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	DDX4	Q9NQI0	724 aa	Known RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	COLQ	Q9Y215	455 aa	Predicted RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.92	□□□□□ -0.18
RPS5-208	ENST00000599909	ZHX2	Q9Y6X8	837 aa		13.92	□□□□□ -0.18
RPS5-208	ENST00000599909		A0A0G2JLL6	359 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS5-208	ENST00000599909		H0YGN5	161 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	PTPRA	P18433	802 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	HOXD10	P28358	340 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	GRK4	P32298	578 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	PRKCZ	Q05513	592 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	ABCF2	Q9UG63	623 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	AFG3L2	Q9Y4W6	797 aa		13.91	□□□□□ -0.18
RPS5-208	ENST00000599909	PDS5A	Q29RF7	1337 aa	Known RBP	13.9	□□□□□ -0.18
RPS5-208	ENST00000599909		A0A1B0GUL7	405 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	CT47B1	P0C2W7	299 aa	Predicted RBP	13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	BTD	P43251	543 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	MAP3K10	Q02779	954 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	TFCP2	Q12800	502 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	PICALM	Q13492	652 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	GADL1	Q6ZQY3	521 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	CCDC84	Q86UT8	332 aa	Predicted RBP	13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	ZNF384	Q8TF68	577 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	XAGE2	Q96GT9	111 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	PICK1	Q9NRD5	415 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	GABRQ	Q9UN88	632 aa		13.9	□□□□□ -0.18
RPS5-208	ENST00000599909	MROH7-TTC4	A0A0A0MT08	1334 aa		13.9	□□□□□ -0.19
RPS5-208	ENST00000599909	SRGAP3	O43295	1099 aa		13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	CCL5	P13501	91 aa		13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	RARS	P54136	660 aa	Known RBP	13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	FCGRT	P55899	365 aa		13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	FASTKD5	Q7L8L6	764 aa	Known RBP	13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	FAM163A	Q96GL9	167 aa	Predicted RBP	13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	HDAC5	Q9UQL6	1122 aa		13.89	□□□□□ -0.19
RPS5-208	ENST00000599909	TRIM75P	A6NK02	468 aa		13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	CTNND1	O60716	968 aa	Known RBP	13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	RHBDL3	P58872	404 aa		13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	MECOM	Q03112	1051 aa		13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	PI16	Q6UXB8	463 aa		13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	SLF2	Q8IX21	1173 aa		13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	BIN2	Q9UBW5	565 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS5-208	ENST00000599909	ATAD5	Q96QE3	1844 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	GPR75-ASB3	A0A0A6YYF3	556 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	FAM196B	A6NMK8	535 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	GJB1	P08034	283 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	GJA8	P48165	433 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	MTX1	Q13505	466 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	MVP	Q14764	893 aa	Known RBP	13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	ERICH6	Q7L0X2	663 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	UBE2Q1	Q7Z7E8	422 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	NKX2-3	Q8TAU0	364 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	RNF208	Q9H0X6	261 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	HMG20B	Q9P0W2	317 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	TNN	Q9UQP3	1299 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	AKAP2	Q9Y2D5	859 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	SLC45A1	Q9Y2W3	748 aa		13.87	□□□□□ -0.19
RPS5-208	ENST00000599909	LOC285556	D6RIA3	1793 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	GNAI3	P08754	354 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	UBXN2A	P68543	259 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	TBC1D9	Q6ZT07	1266 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	SLAIN1	Q8ND83	568 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	DPF3	Q92784	378 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	NEUROD6	Q96NK8	337 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	UNC93B1	Q9H1C4	597 aa		13.86	□□□□□ -0.19
RPS5-208	ENST00000599909	ADCY3	O60266	1144 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	ELN	P15502	786 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	FLT3LG	P49771	235 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	TREML2	Q5T2D2	321 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	CHRDL2	Q6WN34	429 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	SPATA5	Q8NB90	893 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	U2AF1L4	Q8WU68	220 aa	Known RBP	13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	ARHGAP45	Q92619	1136 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	NSUN4	Q96CB9	384 aa	Known RBP	13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	AGTPBP1	Q9UPW5	1226 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	COL2A1	P02458	1487 aa	Predicted RBP	13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	SIPA1L1	O43166	1804 aa		13.85	□□□□□ -0.19
RPS5-208	ENST00000599909	MAST2	Q6P0Q8	1798 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	PNMA6E	A0A0J9YXQ4	647 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	TNPO2	O14787	897 aa	Known RBP	13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	TBC1D12	O60347	775 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	NPM3	O75607	178 aa	Known RBP	13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	INHA	P05111	366 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	TRIM27	P14373	513 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	ARID4A	P29374	1257 aa	Predicted RBP	13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	RRP1B	Q14684	758 aa	Known RBP	13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	ANKRD13C	Q8N6S4	541 aa		13.84	□□□□□ -0.19
RPS5-208	ENST00000599909	FARP2	O94887	1054 aa	Predicted RBP	13.83	□□□□□ -0.2
RPS5-208	ENST00000599909	MCAM	P43121	646 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms