RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
FARP1-223ENST00000598346 ARID5AQ03989 594 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 MPP2Q14168 576 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 ADGRE1Q14246 886 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
FARP1-223ENST00000598346 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
FARP1-223ENST00000598346 SHISA2Q6UWI4 295 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 ACAD11Q709F0 780 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 SREK1Q8WXA9 508 aaKnown RBP9.08□□□□□ -0.96
FARP1-223ENST00000598346 GMLQ99445 158 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 LRRC3Q9BY71 257 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 TMPRSS13Q9BYE2 586 aa9.08□□□□□ -0.96
FARP1-223ENST00000598346 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
FARP1-223ENST00000598346 AOC2O75106 756 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 BPNT1O95861 308 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 H2AFB1P0C5Y9 115 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 H2AFB2P0C5Z0 115 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 SELPP16109 830 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
FARP1-223ENST00000598346 DNAJA1P31689 397 aaKnown RBP9.07□□□□□ -0.96
FARP1-223ENST00000598346 RPL6Q02878 288 aaKnown RBP9.07□□□□□ -0.96
FARP1-223ENST00000598346 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 RUSC1Q9BVN2 902 aa9.07□□□□□ -0.96
FARP1-223ENST00000598346 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 CDK8P49336 464 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 SF3A1Q15459 793 aaKnown RBP9.06□□□□□ -0.96
FARP1-223ENST00000598346 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
FARP1-223ENST00000598346 SEZ6Q53EL9 994 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.06□□□□□ -0.96
FARP1-223ENST00000598346 REC114Q7Z4M0 266 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 NKD1Q969G9 470 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 RAD18Q9NS91 495 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 GINM1Q9NU53 330 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 PRKAG2Q9UGJ0 569 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 PCDHGC5Q9Y5F6 944 aa9.06□□□□□ -0.96
FARP1-223ENST00000598346 SYNGAP1Q96PV0 1343 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 INPP5AQ14642 412 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 LRFN4Q6PJG9 635 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 TMEM130Q8N3G9 435 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 PLPPR2Q96GM1 343 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 SEC16BQ96JE7 1060 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 TANGO6Q9C0B7 1094 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 EFR3BQ9Y2G0 817 aa9.05□□□□□ -0.96
FARP1-223ENST00000598346 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
FARP1-223ENST00000598346 COL9A2Q14055 689 aaPredicted RBP9.04□□□□□ -0.96
FARP1-223ENST00000598346 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
FARP1-223ENST00000598346 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
FARP1-223ENST00000598346 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
FARP1-223ENST00000598346 DRC1Q96MC2 740 aa9.04□□□□□ -0.96
FARP1-223ENST00000598346 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
FARP1-223ENST00000598346 F8W735 103 aaPredicted RBP9.03□□□□□ -0.96
FARP1-223ENST00000598346 GFRA2O00451 464 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 IGSF3O75054 1194 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 FGRP09769 529 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 SOX9P48436 509 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 NASPP49321 788 aaPredicted RBP9.03□□□□□ -0.96
FARP1-223ENST00000598346 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 HDXQ7Z353 690 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 AGGF1Q8N302 714 aaeCLIP9.03□□□□□ -0.96
FARP1-223ENST00000598346 BRMS1Q9HCU9 246 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 USP21Q9UK80 565 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
FARP1-223ENST00000598346 DCDC2CA8MYV0 355 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 MCM4P33991 863 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 ID3Q02535 119 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 PRSS36Q5K4E3 855 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 SMG8Q8ND04 991 aaKnown RBP9.02□□□□□ -0.97
FARP1-223ENST00000598346 ELMO3Q96BJ8 720 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
FARP1-223ENST00000598346 CYP4F12Q9HCS2 524 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 PPP1R9AQ9ULJ8 1098 aa9.02□□□□□ -0.97
FARP1-223ENST00000598346 POLR3KQ9Y2Y1 108 aaPredicted RBP9.02□□□□□ -0.97
FARP1-223ENST00000598346 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
FARP1-223ENST00000598346 ALX3O95076 343 aa9.01□□□□□ -0.97
FARP1-223ENST00000598346 C12orf40Q86WS4 652 aa9.01□□□□□ -0.97
FARP1-223ENST00000598346 PPP1R1BQ9UD71 204 aaPredicted RBP9.01□□□□□ -0.97
FARP1-223ENST00000598346 CSADQ9Y600 493 aa9.01□□□□□ -0.97
FARP1-223ENST00000598346 ADH5P11766 374 aa9□□□□□ -0.97
FARP1-223ENST00000598346 ATP2B1P20020 1258 aa9□□□□□ -0.97
FARP1-223ENST00000598346 ZNF165P49910 485 aa9□□□□□ -0.97
FARP1-223ENST00000598346 ERVK-24P63145 666 aa9□□□□□ -0.97
FARP1-223ENST00000598346 CYFIP1Q7L576 1253 aa9□□□□□ -0.97
FARP1-223ENST00000598346 REXO1Q8N1G1 1221 aaKnown RBP9□□□□□ -0.97
FARP1-223ENST00000598346 C12orf50Q8NA57 414 aaPredicted RBP9□□□□□ -0.97
FARP1-223ENST00000598346 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
FARP1-223ENST00000598346 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
FARP1-223ENST00000598346 HIF3AQ9Y2N7 669 aa9□□□□□ -0.97
FARP1-223ENST00000598346 GRIN3BO60391 1043 aa8.99□□□□□ -0.97
FARP1-223ENST00000598346 TIAF1O95411 115 aa8.99□□□□□ -0.97
FARP1-223ENST00000598346 DRD2P14416 443 aa8.99□□□□□ -0.97
FARP1-223ENST00000598346 RING1Q06587 406 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms