RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
CHMP2A-203ENST00000597209 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
CHMP2A-203ENST00000597209 AK9Q5TCS8 1911 aa22.01■■□□□ 1.11
CHMP2A-203ENST00000597209 SNAPC2Q13487 334 aa22■■□□□ 1.11
CHMP2A-203ENST00000597209 ERC1Q8IUD2 1116 aa22■■□□□ 1.11
CHMP2A-203ENST00000597209 LRP2BPQ9P2M1 347 aa22■■□□□ 1.11
CHMP2A-203ENST00000597209 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 IRF6O14896 467 aa21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 HSP90AB4PQ58FF6 505 aa21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 FBXO46Q6PJ61 603 aaPredicted RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 SH3BP5LQ7L8J4 393 aa21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 RPAP2Q8IXW5 612 aaPredicted RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 EAF2Q96CJ1 260 aaPredicted RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 DDX4Q9NQI0 724 aaKnown RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 DBNLQ9UJU6 430 aaKnown RBP21.99■■□□□ 1.11
CHMP2A-203ENST00000597209 PHF20L1A8MW92 1017 aa21.98■■□□□ 1.11
CHMP2A-203ENST00000597209 ERO1AQ96HE7 468 aa21.98■■□□□ 1.11
CHMP2A-203ENST00000597209 ZFYVE28Q9HCC9 887 aa21.98■■□□□ 1.11
CHMP2A-203ENST00000597209 HPS5Q9UPZ3 1129 aa21.98■■□□□ 1.11
CHMP2A-203ENST00000597209 KCNH4Q9UQ05 1017 aa21.98■■□□□ 1.11
CHMP2A-203ENST00000597209 COL2A1P02458 1487 aaPredicted RBP21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 DDTLA6NHG4 134 aaPredicted RBP21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 TAF1CQ15572 869 aaPredicted RBP21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 ZSCAN29Q8IWY8 852 aaPredicted RBP21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 FAM43AQ8N2R8 423 aa21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 CCDC8Q9H0W5 538 aaPredicted RBP21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 SNRKQ9NRH2 765 aa21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 ZBTB40Q9NUA8 1239 aa21.97■■□□□ 1.11
CHMP2A-203ENST00000597209 TBC1D12O60347 775 aa21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 CYP2E1P05181 493 aaPredicted RBP21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 SP3Q02447 781 aa21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 PICALMQ13492 652 aa21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 EXOC6BQ9Y2D4 811 aa21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 COG6Q9Y2V7 657 aa21.96■■□□□ 1.11
CHMP2A-203ENST00000597209 MAST2Q6P0Q8 1798 aa21.95■■□□□ 1.1
CHMP2A-203ENST00000597209 ZAP70P43403 619 aa21.95■■□□□ 1.1
CHMP2A-203ENST00000597209 PPP4CP60510 307 aa21.95■■□□□ 1.1
CHMP2A-203ENST00000597209 TLR7Q9NYK1 1049 aaKnown RBP21.95■■□□□ 1.1
CHMP2A-203ENST00000597209 BTBD19C9JJ37 291 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 CXCL11O14625 94 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 HMMRO75330 724 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 BAG3O95817 575 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 NAA16Q6N069 864 aaPredicted RBP21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 OTOP1Q7RTM1 612 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 SCYL3Q8IZE3 742 aa21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 NOL10Q9BSC4 688 aaKnown RBP21.94■■□□□ 1.1
CHMP2A-203ENST00000597209 CTNND1O60716 968 aaKnown RBP21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 PLCG2P16885 1265 aa21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 PDE3AQ14432 1141 aa21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 ANKRD23Q86SG2 305 aa21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 OSBPL5Q9H0X9 879 aaPredicted RBP21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 TRIM17Q9Y577 477 aa21.93■■□□□ 1.1
CHMP2A-203ENST00000597209 TLR2O60603 784 aa21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 MLLT1Q03111 559 aaPredicted RBP21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 TMED8Q6PL24 325 aaPredicted RBP21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 AACSQ86V21 672 aa21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 TEX11Q8IYF3 940 aa21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 RHPN1Q8TCX5 695 aa21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 CD99L2Q8TCZ2 262 aa21.92■■□□□ 1.1
CHMP2A-203ENST00000597209 ARHGEF6Q15052 776 aa21.91■■□□□ 1.1
CHMP2A-203ENST00000597209 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
CHMP2A-203ENST00000597209 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
CHMP2A-203ENST00000597209 PICK1Q9NRD5 415 aa21.91■■□□□ 1.1
CHMP2A-203ENST00000597209 PTPRAP18433 802 aa21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 MOGSQ13724 837 aa21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 SH3RF3Q8TEJ3 882 aaPredicted RBP21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 KIF1BPQ96EK5 621 aa21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 EFCC1Q9HA90 598 aa21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 AATFQ9NY61 560 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHMP2A-203ENST00000597209 RAB11FIP3O75154 756 aa21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 ADGRA1Q86SQ6 560 aa21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 DHX36Q9H2U1 1008 aaKnown RBP21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 PTPN22Q9Y2R2 807 aa21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 AFG3L2Q9Y4W6 797 aa21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 ZHX2Q9Y6X8 837 aa21.89■■□□□ 1.09
CHMP2A-203ENST00000597209 DOCK1Q14185 1865 aa21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 MYO5AQ9Y4I1 1855 aaKnown RBP21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 CERS3Q8IU89 383 aa21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 CLASRPQ8N2M8 674 aaKnown RBP21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 IL1RAPL2Q9NP60 686 aa21.88■■□□□ 1.09
CHMP2A-203ENST00000597209 A0A0G2JLL6 359 aaPredicted RBP21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 PDHXO00330 501 aa21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 SLURP2P0DP57 97 aa21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 SOX10P56693 466 aa21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 C17orf99Q6UX52 265 aa21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 FASTKD5Q7L8L6 764 aaKnown RBP21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 PRRT2Q7Z6L0 340 aaPredicted RBP21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 PI4KBQ9UBF8 816 aa21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 HERC5Q9UII4 1024 aaKnown RBP21.87■■□□□ 1.09
CHMP2A-203ENST00000597209 CYP7A1P22680 504 aa21.86■■□□□ 1.09
CHMP2A-203ENST00000597209 CAP1Q01518 475 aa21.86■■□□□ 1.09
CHMP2A-203ENST00000597209 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
CHMP2A-203ENST00000597209 GPAT2Q6NUI2 795 aa21.86■■□□□ 1.09
CHMP2A-203ENST00000597209 FOCADQ5VW36 1801 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 PHIPQ8WWQ0 1821 aa21.85■■□□□ 1.09
CHMP2A-203ENST00000597209 IDH1O75874 414 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms