RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SDF4Q9BRK5 362 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 KRT23Q9C075 422 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 ZNF804BA4D1E1 1349 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 STAG1Q8WVM7 1258 aa26.36■■□□□ 1.81
SRRM1-222ENST00000596378 C8orf37Q96NL8 207 aa26.35■■□□□ 1.81
SRRM1-222ENST00000596378 BCL2L12Q9HB09 334 aa26.35■■□□□ 1.81
SRRM1-222ENST00000596378 MROH7-TTC4A0A0A0MT08 1334 aa26.35■■□□□ 1.81
SRRM1-222ENST00000596378 WDHD1O75717 1129 aaPredicted RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 GTF2E1P29083 439 aaPredicted RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 SF3B3Q15393 1217 aaKnown RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 AXDND1Q5T1B0 1012 aaPredicted RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 CCDC186Q7Z3E2 898 aa26.34■■□□□ 1.81
SRRM1-222ENST00000596378 CCDC24Q8N4L8 307 aa26.34■■□□□ 1.81
SRRM1-222ENST00000596378 MINPP1Q9UNW1 487 aa26.34■■□□□ 1.81
SRRM1-222ENST00000596378 GOLGA6L19H0YKK7 550 aa26.34■■□□□ 1.81
SRRM1-222ENST00000596378 GNL2Q13823 731 aaKnown RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 SRP68Q9UHB9 627 aaKnown RBP26.34■■□□□ 1.81
SRRM1-222ENST00000596378 MINDY4BA8MYZ0 360 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 CAVIN2O95810 425 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 GUCY1A2P33402 732 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 CMTR1Q8N1G2 835 aaKnown RBP26.33■■□□□ 1.81
SRRM1-222ENST00000596378 BSDC1Q9NW68 430 aaPredicted RBP26.33■■□□□ 1.81
SRRM1-222ENST00000596378 KLRK1P26718 216 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 PPARAQ07869 468 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 DHX40Q8IX18 779 aaKnown RBP26.33■■□□□ 1.81
SRRM1-222ENST00000596378 CCDC82Q8N4S0 544 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 KIAA1524Q8TCG1 905 aa26.33■■□□□ 1.81
SRRM1-222ENST00000596378 UQCRHLA0A096LP55 91 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 UQCRHP07919 91 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 TERF1P54274 439 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 ANO10Q9NW15 660 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 MAGEB6P1A0A0J9YX57 407 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 TPM3P06753 285 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 SSRP1Q08945 709 aaKnown RBP26.32■■□□□ 1.8
SRRM1-222ENST00000596378 LRMPQ12912 555 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 WTAPQ15007 396 aa26.32■■□□□ 1.8
SRRM1-222ENST00000596378 PFKFB1P16118 471 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 DYNLL1P63167 89 aaKnown RBP26.31■■□□□ 1.8
SRRM1-222ENST00000596378 UBE4AQ14139 1066 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 SLC39A14Q15043 492 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 SPTLC3Q9NUV7 552 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 GNL3LQ9NVN8 582 aaKnown RBP26.31■■□□□ 1.8
SRRM1-222ENST00000596378 CACNA1SQ13698 1873 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 TRIM29Q14134 588 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 FAM182BQ5T319 152 aa26.31■■□□□ 1.8
SRRM1-222ENST00000596378 FAM84BQ96KN1 310 aaPredicted RBP26.31■■□□□ 1.8
SRRM1-222ENST00000596378 ZNF202O95125 648 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 FMNL1O95466 1100 aaPredicted RBP26.3■■□□□ 1.8
SRRM1-222ENST00000596378 NGLY1Q96IV0 654 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 CLIP2Q9UDT6 1046 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 BAZ2AQ9UIF9 1905 aaKnown RBP26.3■■□□□ 1.8
SRRM1-222ENST00000596378 CYP2D7A0A087X1C5 515 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 BECN2A8MW95 431 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 AOPEPQ8N6M6 819 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 ZNF384Q8TF68 577 aa26.3■■□□□ 1.8
SRRM1-222ENST00000596378 RIOK1Q9BRS2 568 aaKnown RBP26.3■■□□□ 1.8
SRRM1-222ENST00000596378 SCN7AQ01118 1682 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 SART3Q15020 963 aaKnown RBP26.29■■□□□ 1.8
SRRM1-222ENST00000596378 RTN1Q16799 776 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 CAVIN4Q5BKX8 364 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 NUP133Q8WUM0 1156 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.29■■□□□ 1.8
SRRM1-222ENST00000596378 CNTNAP4Q9C0A0 1308 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 KIAA1468Q9P260 1216 aa26.29■■□□□ 1.8
SRRM1-222ENST00000596378 IFNAR1P17181 557 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 PTPAQ15257 358 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 DPCR1Q3MIW9 517 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 CCDC144BQ3MJ40 725 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 MAP3K14Q99558 947 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 KCNJ14Q9UNX9 436 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 ZNF831Q5JPB2 1677 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 BIN1O00499 593 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 CMA1P23946 247 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 U2AF2P26368 475 aaKnown RBP eCLIP26.28■■□□□ 1.81e-9■■■■□ 23.1
SRRM1-222ENST00000596378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.28■■□□□ 1.8
SRRM1-222ENST00000596378 CEP57L1Q8IYX8 460 aa26.28■■□□□ 1.8
SRRM1-222ENST00000596378 STK36Q9NRP7 1315 aa26.27■■□□□ 1.8
SRRM1-222ENST00000596378 ERICH2A1L162 156 aa26.27■■□□□ 1.8
SRRM1-222ENST00000596378 AMIGO3Q86WK7 504 aa26.27■■□□□ 1.8
SRRM1-222ENST00000596378 RGS22Q8NE09 1264 aa26.27■■□□□ 1.8
SRRM1-222ENST00000596378 CLIC6Q96NY7 704 aa26.27■■□□□ 1.8
SRRM1-222ENST00000596378 RNF41Q9H4P4 317 aaPredicted RBP26.27■■□□□ 1.8
SRRM1-222ENST00000596378 SHC4Q6S5L8 630 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 NID2Q14112 1375 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 BTBD18B2RXH4 712 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 GNPATO15228 680 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 SARM1Q6SZW1 724 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 ZNF654Q8IZM8 581 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 UBAC1Q9BSL1 405 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 TFCP2L1Q9NZI6 479 aa26.26■■□□□ 1.79
SRRM1-222ENST00000596378 MYH2Q9UKX2 1941 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 SLC3A2P08195 630 aaKnown RBP26.25■■□□□ 1.79
SRRM1-222ENST00000596378 NBPF11Q86T75 865 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 NBPF5PQ86XG9 351 aaPredicted RBP26.25■■□□□ 1.79
SRRM1-222ENST00000596378 TNKSO95271 1327 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 PRDM1O75626 825 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 EVX2Q03828 476 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 VPS72Q15906 364 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 SLC10A5Q5PT55 438 aa26.25■■□□□ 1.79
SRRM1-222ENST00000596378 SETDB2Q96T68 719 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms