RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 GGA1Q9UJY5 639 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 KNSTRNQ9Y448 316 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 FAM13AO94988 1023 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 INHAP05111 366 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 BMP4P12644 408 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 MAPK1P28482 360 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 STAG2Q8N3U4 1231 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 PIGBQ92521 554 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 ANO2Q9NQ90 1003 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 KIAA1522Q9P206 1035 aaPredicted RBP10.17□□□□□ -0.78
VMP1-213ENST00000591877 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
VMP1-213ENST00000591877 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
VMP1-213ENST00000591877 PALLDQ8WX93 1383 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 GNRH1P01148 92 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 PHKG2P15735 406 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 VAMP1P23763 118 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 UBAP2LQ14157 1087 aaKnown RBP10.16□□□□□ -0.78
VMP1-213ENST00000591877 BTBD6Q96KE9 485 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
VMP1-213ENST00000591877 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 UBR3Q6ZT12 1888 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 FBXO33Q7Z6M2 555 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 IFNL2Q8IZJ0 200 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 RGL4Q8IZJ4 473 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 SCG3Q8WXD2 468 aaKnown RBP10.15□□□□□ -0.78
VMP1-213ENST00000591877 ABHD17AQ96GS6 310 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 BCL11AQ9H165 835 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 RUBCNLQ9H714 662 aa10.15□□□□□ -0.78
VMP1-213ENST00000591877 VIRMAQ69YN4 1812 aaKnown RBP10.14□□□□□ -0.79
VMP1-213ENST00000591877 PIK3R2O00459 728 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 LGR5O75473 907 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 IL13P35225 146 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 CTBSQ01459 385 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 SLCO4C1Q6ZQN7 724 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 COL23A1Q86Y22 540 aaPredicted RBP10.14□□□□□ -0.79
VMP1-213ENST00000591877 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
VMP1-213ENST00000591877 ETNK1Q9HBU6 452 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 TFCP2L1Q9NZI6 479 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 KDRP35968 1356 aa10.14□□□□□ -0.79
VMP1-213ENST00000591877 MTHFSP49914 203 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 CAPN12Q6ZSI9 719 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 VTI1AQ96AJ9 217 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 SYT17Q9BSW7 474 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 RBCK1Q9BYM8 510 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 ASAP1Q9ULH1 1129 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 KDM6AO15550 1401 aaPredicted RBP10.13□□□□□ -0.79
VMP1-213ENST00000591877 SCN11AQ9UI33 1791 aa10.13□□□□□ -0.79
VMP1-213ENST00000591877 CENPCQ03188 943 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 MTFR1Q15390 333 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 CC2D1BQ5T0F9 858 aaKnown RBP10.12□□□□□ -0.79
VMP1-213ENST00000591877 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
VMP1-213ENST00000591877 ATG3Q9NT62 314 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 SCHIP1Q9P0W5 487 aaPredicted RBP10.12□□□□□ -0.79
VMP1-213ENST00000591877 ATXN7L1Q9ULK2 861 aaPredicted RBP10.12□□□□□ -0.79
VMP1-213ENST00000591877 ZNF831Q5JPB2 1677 aa10.12□□□□□ -0.79
VMP1-213ENST00000591877 COL5A3P25940 1745 aaPredicted RBP10.11□□□□□ -0.79
VMP1-213ENST00000591877 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 EPXP11678 715 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 FGFR3P22607 806 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 DGKGP49619 791 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 ITPK1Q13572 414 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
VMP1-213ENST00000591877 SMIM5Q71RC9 77 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 CNKSR1Q969H4 720 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
VMP1-213ENST00000591877 MAP3K5Q99683 1374 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 NPC1L1Q9UHC9 1359 aa10.11□□□□□ -0.79
VMP1-213ENST00000591877 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
VMP1-213ENST00000591877 LOC102724428A0A0B4J2F2 783 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 IL2RAP01589 272 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 SIK1P57059 783 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 MTMR3Q13615 1198 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 AMOTQ4VCS5 1084 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 C16orf46Q6P387 395 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
VMP1-213ENST00000591877 LINC00116Q8NCU8 138 aa10.1□□□□□ -0.79
VMP1-213ENST00000591877 NOP53Q9NZM5 478 aaKnown RBP10.1□□□□□ -0.79
VMP1-213ENST00000591877 MYH14Q7Z406 1995 aaKnown RBP10.09□□□□□ -0.79
VMP1-213ENST00000591877 SCO2A0A1W2PP80 73 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 NEURL1BA8MQ27 555 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 NDUFB5O43674 189 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 BNIP3LO60238 219 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 NAA30Q147X3 362 aaPredicted RBP10.09□□□□□ -0.79
VMP1-213ENST00000591877 LCE3BQ5TA77 95 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 ALKBH2Q6NS38 261 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
VMP1-213ENST00000591877 ESYT1Q9BSJ8 1104 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 ADAMTS7Q9UKP4 1686 aa10.09□□□□□ -0.79
VMP1-213ENST00000591877 CHD4Q14839 1912 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 A6NJY4 79 aa10.08□□□□□ -0.8
VMP1-213ENST00000591877 PPP1R12BO60237 982 aaPredicted RBP10.08□□□□□ -0.8
VMP1-213ENST00000591877 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms