RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 GINS2Q9Y248 185 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 TESK2Q96S53 571 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 NACA2Q9H009 215 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
SEH1L-208ENST00000590843 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
SEH1L-208ENST00000590843 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
SEH1L-208ENST00000590843 XPOTO43592 962 aaKnown RBP13.03□□□□□ -0.32
SEH1L-208ENST00000590843 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
SEH1L-208ENST00000590843 HAND2P61296 217 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 NFIXQ14938 502 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 AOC3Q16853 763 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 ADPGKQ9BRR6 497 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 APPBP2Q92624 585 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 SSX2IPQ9Y2D8 614 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 CHST3Q7LGC8 479 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
SEH1L-208ENST00000590843 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 USP17L5A8MUK1 530 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 FAM13AO94988 1023 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 KANSL2Q9H9L4 492 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 RRAGCQ9HB90 399 aa13.02□□□□□ -0.32
SEH1L-208ENST00000590843 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.32
SEH1L-208ENST00000590843 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.32
SEH1L-208ENST00000590843 GTF2A2P52657 109 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 HAUS3Q68CZ6 603 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 NBPF15Q8N660 670 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 H0YCG3 227 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 MANSC4A6NHS7 340 aaPredicted RBP13.02□□□□□ -0.33
SEH1L-208ENST00000590843 CA12O43570 354 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
SEH1L-208ENST00000590843 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
SEH1L-208ENST00000590843 PRDM5Q9NQX1 630 aaPredicted RBP13.02□□□□□ -0.33
SEH1L-208ENST00000590843 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
SEH1L-208ENST00000590843 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 MARCKSP29966 332 aaPredicted RBP13.01□□□□□ -0.33
SEH1L-208ENST00000590843 ZBTB8OSQ8IWT0 167 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
SEH1L-208ENST00000590843 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 NLRP10Q86W26 655 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 TRMT44Q8IYL2 757 aaKnown RBP13.01□□□□□ -0.33
SEH1L-208ENST00000590843 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 KDRP35968 1356 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 GCOM1H8Y6P7 765 aaPredicted RBP13.01□□□□□ -0.33
SEH1L-208ENST00000590843 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 CHRNA5P30532 468 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
SEH1L-208ENST00000590843 IDEP14735 1019 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 TNNI3KQ59H18 835 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
SEH1L-208ENST00000590843 TRIM47Q96LD4 638 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 TRIM75PA6NK02 468 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 SSR1P43307 286 aaKnown RBP13□□□□□ -0.33
SEH1L-208ENST00000590843 ANAPC15P60006 121 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 CLIP2Q9UDT6 1046 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 CCPG1Q9ULG6 757 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 PPP2R3BQ9Y5P8 575 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
SEH1L-208ENST00000590843 INHBEP58166 350 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 CHADLQ6NUI6 762 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 KANK3Q6NY19 840 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
SEH1L-208ENST00000590843 FAM114A1Q8IWE2 563 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 RPS6KC1Q96S38 1066 aa13□□□□□ -0.33
SEH1L-208ENST00000590843 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
SEH1L-208ENST00000590843 TFDP1Q14186 410 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 ATP8A2Q9NTI2 1148 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 CARD14Q9BXL6 1004 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 CFBP00751 764 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
SEH1L-208ENST00000590843 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
SEH1L-208ENST00000590843 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
SEH1L-208ENST00000590843 ATF7P17544 494 aaPredicted RBP12.99□□□□□ -0.33
SEH1L-208ENST00000590843 ZNF354CQ86Y25 554 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms