RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 GMLQ99445 158 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
VPS25-205ENST00000590339 MYOZ2Q9NPC6 264 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 TLL2Q9Y6L7 1015 aa11.18□□□□□ -0.62
VPS25-205ENST00000590339 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 F8W031 263 aaPredicted RBP11.17□□□□□ -0.62
VPS25-205ENST00000590339 SEMA3EO15041 775 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 BCAMP50895 628 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 TOB2Q14106 344 aaPredicted RBP11.17□□□□□ -0.62
VPS25-205ENST00000590339 ANKRD1Q15327 319 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 NEK1Q96PY6 1258 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
VPS25-205ENST00000590339 ADAMTSL1Q8N6G6 1762 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 FOXN1O15353 648 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 AOC2O75106 756 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
VPS25-205ENST00000590339 BRD1O95696 1058 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 ECE1P42892 770 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 PKP1Q13835 747 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 ZNF804AQ7Z570 1209 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 AGXT2Q9BYV1 514 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 CTNNA3Q9UI47 895 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 TPCN1Q9ULQ1 816 aa11.16□□□□□ -0.62
VPS25-205ENST00000590339 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
VPS25-205ENST00000590339 GYG1P46976 350 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 HUNKP57058 714 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 ALX1Q15699 326 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 ME3Q16798 604 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 C15orf52Q6ZUT6 534 aaKnown RBP11.15□□□□□ -0.62
VPS25-205ENST00000590339 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
VPS25-205ENST00000590339 GNL3LQ9NVN8 582 aaKnown RBP11.15□□□□□ -0.62
VPS25-205ENST00000590339 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 DENND2AQ9ULE3 1009 aa11.15□□□□□ -0.62
VPS25-205ENST00000590339 MYO3BQ8WXR4 1341 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 E7EWF7 191 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 WNT10BO00744 389 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 PTMSP20962 102 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 HIBADHP31937 336 aaKnown RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 CDCA5Q96FF9 252 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 GBA2Q9HCG7 927 aaPredicted RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
VPS25-205ENST00000590339 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.14□□□□□ -0.63
VPS25-205ENST00000590339 WDR19Q8NEZ3 1342 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 IGSF3O75054 1194 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 FGAP02671 866 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 IL1R1P14778 569 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.63
VPS25-205ENST00000590339 LBX1P52954 281 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 CAVIN4Q5BKX8 364 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 VPS37DQ86XT2 251 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 CCDC83Q8IWF9 413 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 CERS5Q8N5B7 392 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 TCEANC2Q96MN5 208 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 NBPF3Q9H094 633 aa11.13□□□□□ -0.63
VPS25-205ENST00000590339 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
VPS25-205ENST00000590339 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 MYH15Q9Y2K3 1946 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 MBD4O95243 580 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 ZNF157P51786 506 aaPredicted RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 CHAF1AQ13111 956 aaPredicted RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 DLGAP5Q15398 846 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 Q6ZUG5 572 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 GTF3C6Q969F1 213 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
VPS25-205ENST00000590339 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 PCDHAC2Q9Y5I4 1007 aa11.12□□□□□ -0.63
VPS25-205ENST00000590339 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
VPS25-205ENST00000590339 CDK5RAP2Q96SN8 1893 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms