RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
MBD3-206ENST00000589901 MROH7-TTC4A0A0A0MT08 1334 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 DDTLA6NHG4 134 aaPredicted RBP20.13■□□□□ 0.81
MBD3-206ENST00000589901 CTGFP29279 349 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 PICALMQ13492 652 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 SLF2Q8IX21 1173 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 SH3TC2Q8TF17 1288 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 ZNF384Q8TF68 577 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 HMG20BQ9P0W2 317 aa20.13■□□□□ 0.81
MBD3-206ENST00000589901 ADGRA2Q96PE1 1338 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 GPAT2Q6NUI2 795 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 ZHX2Q9Y6X8 837 aa20.12■□□□□ 0.81
MBD3-206ENST00000589901 ZSWIM8A7E2V4 1837 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
MBD3-206ENST00000589901 GPR75-ASB3A0A0A6YYF3 556 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 CXCL11O14625 94 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 PTPRAP18433 802 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 RHBDL3P58872 404 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 MAP3K10Q02779 954 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 GORABQ5T7V8 394 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 SPATA5Q8NB90 893 aa20.11■□□□□ 0.81
MBD3-206ENST00000589901 GNRH1P01148 92 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 CYP2C8P10632 490 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 PSMC4P43686 418 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
MBD3-206ENST00000589901 SLC4A8Q2Y0W8 1093 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 PICK1Q9NRD5 415 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
MBD3-206ENST00000589901 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
MBD3-206ENST00000589901 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
MBD3-206ENST00000589901 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.09■□□□□ 0.81
MBD3-206ENST00000589901 MYH2Q9UKX2 1941 aa20.09■□□□□ 0.81
MBD3-206ENST00000589901 A0A0G2JLL6 359 aaPredicted RBP20.08■□□□□ 0.81
MBD3-206ENST00000589901 PRRT2Q7Z6L0 340 aaPredicted RBP20.08■□□□□ 0.81
MBD3-206ENST00000589901 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
MBD3-206ENST00000589901 RAI14Q9P0K7 980 aa20.08■□□□□ 0.81
MBD3-206ENST00000589901 AFG3L2Q9Y4W6 797 aa20.08■□□□□ 0.81
MBD3-206ENST00000589901 RBBP6Q7Z6E9 1792 aaKnown RBP20.08■□□□□ 0.8
MBD3-206ENST00000589901 FAM196BA6NMK8 535 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 CTNND1O60716 968 aaKnown RBP20.07■□□□□ 0.8
MBD3-206ENST00000589901 FMNL1O95466 1100 aaPredicted RBP20.07■□□□□ 0.8
MBD3-206ENST00000589901 OSBPP22059 807 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 MCAMP43121 646 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 PRMT2P55345 433 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 ZKSCAN2Q63HK3 967 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 CCDC84Q86UT8 332 aaPredicted RBP20.07■□□□□ 0.8
MBD3-206ENST00000589901 SRRDQ9UH36 339 aa20.07■□□□□ 0.8
MBD3-206ENST00000589901 BCRP11274 1271 aa20.06■□□□□ 0.8
MBD3-206ENST00000589901 GSTO1P78417 241 aa20.06■□□□□ 0.8
MBD3-206ENST00000589901 GADL1Q6ZQY3 521 aa20.06■□□□□ 0.8
MBD3-206ENST00000589901 FASTKD5Q7L8L6 764 aaKnown RBP20.06■□□□□ 0.8
MBD3-206ENST00000589901 DOCK2Q92608 1830 aa20.06■□□□□ 0.8
MBD3-206ENST00000589901 TRIM75PA6NK02 468 aa20.05■□□□□ 0.8
MBD3-206ENST00000589901 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
MBD3-206ENST00000589901 LDHCP07864 332 aa20.05■□□□□ 0.8
MBD3-206ENST00000589901 POLA2Q14181 598 aa20.05■□□□□ 0.8
MBD3-206ENST00000589901 SNRKQ9NRH2 765 aa20.05■□□□□ 0.8
MBD3-206ENST00000589901 MYPNQ86TC9 1320 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 TBC1D12O60347 775 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 UQCRFS1P1P0C7P4 283 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 HOXD10P28358 340 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 MTFR1Q15390 333 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 RAET1EQ8TD07 263 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.04■□□□□ 0.8
MBD3-206ENST00000589901 LRP2BPQ9P2M1 347 aa20.04■□□□□ 0.8
MBD3-206ENST00000589901 PRKCZQ05513 592 aa20.03■□□□□ 0.8
MBD3-206ENST00000589901 TNNI3KQ59H18 835 aa20.03■□□□□ 0.8
MBD3-206ENST00000589901 SSH3Q8TE77 659 aa20.03■□□□□ 0.8
MBD3-206ENST00000589901 DBNDD2Q9BQY9 259 aa20.03■□□□□ 0.8
MBD3-206ENST00000589901 OSBPL5Q9H0X9 879 aaPredicted RBP20.03■□□□□ 0.8
MBD3-206ENST00000589901 FPGT-TNNI3KV9GXZ4 949 aa20.03■□□□□ 0.8
MBD3-206ENST00000589901 MAP4K4O95819 1239 aaPredicted RBP20.02■□□□□ 0.8
MBD3-206ENST00000589901 GRK4P32298 578 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 FCGRTP55899 365 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 ATP8B2P98198 1209 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.8
MBD3-206ENST00000589901 OS9Q13438 667 aaPredicted RBP20.02■□□□□ 0.8
MBD3-206ENST00000589901 TTC39AQ5SRH9 613 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 SH3RF3Q8TEJ3 882 aaPredicted RBP20.02■□□□□ 0.8
MBD3-206ENST00000589901 GCC1Q96CN9 775 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 GPR108Q9NPR9 543 aa20.02■□□□□ 0.8
MBD3-206ENST00000589901 SURF6O75683 361 aaKnown RBP20.01■□□□□ 0.79
MBD3-206ENST00000589901 RRP1BQ14684 758 aaKnown RBP20.01■□□□□ 0.79
MBD3-206ENST00000589901 TEX11Q8IYF3 940 aa20.01■□□□□ 0.79
MBD3-206ENST00000589901 GABRQQ9UN88 632 aa20.01■□□□□ 0.79
MBD3-206ENST00000589901 SLC45A1Q9Y2W3 748 aa20.01■□□□□ 0.79
MBD3-206ENST00000589901 RLBP1P12271 317 aa20■□□□□ 0.79
MBD3-206ENST00000589901 CCDC158Q5M9N0 1113 aa20■□□□□ 0.79
MBD3-206ENST00000589901 TREML2Q5T2D2 321 aa20■□□□□ 0.79
MBD3-206ENST00000589901 NAA16Q6N069 864 aaPredicted RBP20■□□□□ 0.79
MBD3-206ENST00000589901 MIER1Q8N108 512 aa20■□□□□ 0.79
MBD3-206ENST00000589901 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms