RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 GPR108Q9NPR9 543 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 COL1A1P02452 1464 aaPredicted RBP12.73□□□□□ -0.37
SDF2-208ENST00000589788 LDHBP07195 334 aaKnown RBP12.73□□□□□ -0.37
SDF2-208ENST00000589788 NF2P35240 595 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 GRIK5Q16478 980 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 TNNI3KQ59H18 835 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
SDF2-208ENST00000589788 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
SDF2-208ENST00000589788 EXOC6BQ9Y2D4 811 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 FPGT-TNNI3KV9GXZ4 949 aa12.73□□□□□ -0.37
SDF2-208ENST00000589788 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
SDF2-208ENST00000589788 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 ECE1P42892 770 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 VEGFBP49765 207 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 HUNKP57058 714 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 GRM1Q13255 1194 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
SDF2-208ENST00000589788 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
SDF2-208ENST00000589788 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 APBB1O00213 710 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 TNFAIP1Q13829 316 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.37
SDF2-208ENST00000589788 METTL3Q86U44 580 aaKnown RBP12.71□□□□□ -0.37
SDF2-208ENST00000589788 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
SDF2-208ENST00000589788 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
SDF2-208ENST00000589788 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 PPP2R3BQ9Y5P8 575 aa12.71□□□□□ -0.37
SDF2-208ENST00000589788 ARID4AP29374 1257 aaPredicted RBP12.7□□□□□ -0.38
SDF2-208ENST00000589788 PRDX5P30044 214 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 FKBP1BP68106 108 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 CYP4F22Q6NT55 531 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 DZIP1Q86YF9 867 aaKnown RBP12.7□□□□□ -0.38
SDF2-208ENST00000589788 SIRT2Q8IXJ6 389 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 DBNDD2Q9BQY9 259 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 HMG20BQ9P0W2 317 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 CEP350Q5VT06 3117 aa12.7□□□□□ -0.38
SDF2-208ENST00000589788 AOX1Q06278 1338 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 TNNI2P48788 182 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 AACSQ86V21 672 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
SDF2-208ENST00000589788 KIF1BPQ96EK5 621 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 CCDC8Q9H0W5 538 aaPredicted RBP12.69□□□□□ -0.38
SDF2-208ENST00000589788 BCL11AQ9H165 835 aa12.69□□□□□ -0.38
SDF2-208ENST00000589788 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
SDF2-208ENST00000589788 COL9A1P20849 921 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 MCAMP43121 646 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
SDF2-208ENST00000589788 RASA3Q14644 834 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 DIXDC1Q155Q3 683 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 RGMBQ6NW40 437 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
SDF2-208ENST00000589788 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
SDF2-208ENST00000589788 DBNLQ9UJU6 430 aaKnown RBP12.68□□□□□ -0.38
SDF2-208ENST00000589788 ZNF157P51786 506 aaPredicted RBP12.67□□□□□ -0.38
SDF2-208ENST00000589788 PRSS12P56730 875 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 PRKG1Q13976 671 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 APOBEC3HQ6NTF7 200 aaKnown RBP12.67□□□□□ -0.38
SDF2-208ENST00000589788 ARMC9Q7Z3E5 817 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
SDF2-208ENST00000589788 RAI14Q9P0K7 980 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 FAM198AQ9UFP1 575 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 DAGLAQ9Y4D2 1042 aa12.67□□□□□ -0.38
SDF2-208ENST00000589788 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 PPP1R12BO60237 982 aaPredicted RBP12.66□□□□□ -0.38
SDF2-208ENST00000589788 IFIT2P09913 472 aaKnown RBP12.66□□□□□ -0.38
SDF2-208ENST00000589788 CLCN1P35523 988 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 CACNB3P54284 484 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 GSTO1P78417 241 aa12.66□□□□□ -0.38
SDF2-208ENST00000589788 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms