RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MFAP1P55081 439 aaKnown RBP23.52■■□□□ 1.36
CIRBP-220ENST00000588917 OSBP2Q969R2 916 aa23.52■■□□□ 1.36
CIRBP-220ENST00000588917 MBD4O95243 580 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 NF2P35240 595 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 ECE1P42892 770 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 LBX1P52954 281 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 CACNB3P54284 484 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 MCMDC2Q4G0Z9 681 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 SKAP1Q86WV1 359 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 RUFY2Q8WXA3 655 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 DDRGK1Q96HY6 314 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 ATP8A2Q9NTI2 1148 aa23.51■■□□□ 1.35
CIRBP-220ENST00000588917 MYO5AQ9Y4I1 1855 aaKnown RBP23.51■■□□□ 1.35
CIRBP-220ENST00000588917 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
CIRBP-220ENST00000588917 TGFBRAP1Q8WUH2 860 aa23.5■■□□□ 1.35
CIRBP-220ENST00000588917 CAPNS2Q96L46 248 aa23.5■■□□□ 1.35
CIRBP-220ENST00000588917 STRBPQ96SI9 672 aaKnown RBP23.5■■□□□ 1.35
CIRBP-220ENST00000588917 ARMT1Q9H993 441 aa23.5■■□□□ 1.35
CIRBP-220ENST00000588917 FAM198AQ9UFP1 575 aa23.5■■□□□ 1.35
CIRBP-220ENST00000588917 ADM5C9JUS6 153 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 CHGBP05060 677 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 NFIAQ12857 509 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 PICALMQ13492 652 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 PAXIP1Q6ZW49 1069 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-220ENST00000588917 LCORLQ8N3X6 602 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 DHX36Q9H2U1 1008 aaKnown RBP23.49■■□□□ 1.35
CIRBP-220ENST00000588917 TLL2Q9Y6L7 1015 aa23.49■■□□□ 1.35
CIRBP-220ENST00000588917 ECM29Q5VYK3 1845 aa23.48■■□□□ 1.35
CIRBP-220ENST00000588917 GPAA1O43292 621 aa23.48■■□□□ 1.35
CIRBP-220ENST00000588917 TCP10Q12799 353 aa23.48■■□□□ 1.35
CIRBP-220ENST00000588917 NMIQ13287 307 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-220ENST00000588917 ZSCAN29Q8IWY8 852 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-220ENST00000588917 CDCA5Q96FF9 252 aa23.48■■□□□ 1.35
CIRBP-220ENST00000588917 SLC4A4Q9Y6R1 1079 aa23.48■■□□□ 1.35
CIRBP-220ENST00000588917 GIMAP6Q6P9H5 292 aa23.47■■□□□ 1.35
CIRBP-220ENST00000588917 CASC1Q6TDU7 716 aa23.47■■□□□ 1.35
CIRBP-220ENST00000588917 CWC27Q6UX04 472 aaKnown RBP23.47■■□□□ 1.35
CIRBP-220ENST00000588917 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
CIRBP-220ENST00000588917 TMEM39BQ9GZU3 492 aa23.47■■□□□ 1.35
CIRBP-220ENST00000588917 OSBPL5Q9H0X9 879 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-220ENST00000588917 SCAF8Q9UPN6 1271 aaKnown RBP23.47■■□□□ 1.35
CIRBP-220ENST00000588917 RPAP1Q9BWH6 1393 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-220ENST00000588917 PATL2C9JE40 543 aaKnown RBP23.46■■□□□ 1.35
CIRBP-220ENST00000588917 HSPA8P11142 646 aaKnown RBP23.46■■□□□ 1.35
CIRBP-220ENST00000588917 CHMLP26374 656 aa23.46■■□□□ 1.35
CIRBP-220ENST00000588917 CYP4F22Q6NT55 531 aa23.46■■□□□ 1.35
CIRBP-220ENST00000588917 FAM227BQ96M60 508 aa23.46■■□□□ 1.35
CIRBP-220ENST00000588917 NACAP1Q9BZK3 213 aa23.46■■□□□ 1.35
CIRBP-220ENST00000588917 DDX4Q9NQI0 724 aaKnown RBP23.46■■□□□ 1.35
CIRBP-220ENST00000588917 FLT1P17948 1338 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 M0R2C6 588 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 CELF2O95319 508 aaKnown RBP23.45■■□□□ 1.34
CIRBP-220ENST00000588917 GRM1Q13255 1194 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 MAPKAPK5Q8IW41 473 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 TEPSINQ96N21 525 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 BEGAINQ9BUH8 593 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 MYH7P12883 1935 aa23.45■■□□□ 1.34
CIRBP-220ENST00000588917 A0A0D9SFI3 127 aa23.44■■□□□ 1.34
CIRBP-220ENST00000588917 PPP1R12BO60237 982 aaPredicted RBP23.44■■□□□ 1.34
CIRBP-220ENST00000588917 APPP05067 770 aa23.44■■□□□ 1.34
CIRBP-220ENST00000588917 FKBP1BP68106 108 aa23.44■■□□□ 1.34
CIRBP-220ENST00000588917 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
CIRBP-220ENST00000588917 SAPCD2Q86UD0 394 aa23.44■■□□□ 1.34
CIRBP-220ENST00000588917 RAD50Q92878 1312 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 HLA-DOAP06340 250 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 MAP2K2P36507 400 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 NBPF12Q5TAG4 269 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-220ENST00000588917 PRAMEF18Q5VWM3 479 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 DCAF15Q66K64 600 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 FOXP4Q8IVH2 680 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-220ENST00000588917 ZFPM1Q8IX07 1006 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 C2orf69Q8N8R5 385 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 SDR42E1Q8WUS8 393 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 CSRNP1Q96S65 589 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 DCP1AQ9NPI6 582 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-220ENST00000588917 PI4KBQ9UBF8 816 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 TAOK2Q9UL54 1235 aa23.43■■□□□ 1.34
CIRBP-220ENST00000588917 COL2A1P02458 1487 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-220ENST00000588917 ATRNL1Q5VV63 1379 aa23.42■■□□□ 1.34
CIRBP-220ENST00000588917 PRKAB2O43741 272 aa23.42■■□□□ 1.34
CIRBP-220ENST00000588917 CDC45O75419 566 aa23.42■■□□□ 1.34
CIRBP-220ENST00000588917 POLR3DP05423 398 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-220ENST00000588917 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
CIRBP-220ENST00000588917 MCM9Q9NXL9 1143 aa23.42■■□□□ 1.34
CIRBP-220ENST00000588917 CCDC171Q6TFL3 1326 aa23.41■■□□□ 1.34
CIRBP-220ENST00000588917 GSG1L2A8MUP6 293 aa23.41■■□□□ 1.34
CIRBP-220ENST00000588917 ARMC9Q7Z3E5 817 aa23.41■■□□□ 1.34
CIRBP-220ENST00000588917 HHIPL1Q96JK4 782 aa23.41■■□□□ 1.34
CIRBP-220ENST00000588917 POLR2AP24928 1970 aaKnown RBP23.4■■□□□ 1.34
CIRBP-220ENST00000588917 DDTLA6NHG4 134 aaPredicted RBP23.4■■□□□ 1.34
CIRBP-220ENST00000588917 TBC1D12O60347 775 aa23.4■■□□□ 1.34
CIRBP-220ENST00000588917 DLK2Q6UY11 383 aa23.4■■□□□ 1.34
CIRBP-220ENST00000588917 IFNL3Q8IZI9 196 aa23.4■■□□□ 1.34
CIRBP-220ENST00000588917 PALD1Q9ULE6 856 aa23.4■■□□□ 1.34
CIRBP-220ENST00000588917 UNCXA6NJT0 531 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 MAP3K10Q02779 954 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 CCDC129Q6ZRS4 1044 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 SH3BP5LQ7L8J4 393 aa23.39■■□□□ 1.33
CIRBP-220ENST00000588917 TRIM34Q9BYJ4 488 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms