RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
NLE1-205ENST00000588642 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
NLE1-205ENST00000588642 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
NLE1-205ENST00000588642 FLT1P17948 1338 aa16.67■□□□□ 0.26
NLE1-205ENST00000588642 CLRN2A0PK11 232 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 CYP2D6P10635 497 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 NEK4P51957 841 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 NFIAQ12857 509 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 SLC4A8Q2Y0W8 1093 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 SAMD7Q7Z3H4 446 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 ZBED3Q96IU2 234 aaPredicted RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 UPF3BQ9BZI7 483 aaKnown RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
NLE1-205ENST00000588642 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
NLE1-205ENST00000588642 WNT10BO00744 389 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 TCP10Q12799 353 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 TRDNQ13061 729 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 NBPF9Q3BBW0 867 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 C12orf60Q5U649 245 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 BLOC1S2Q6QNY1 142 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 NBPF3Q9H094 633 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 RNF41Q9H4P4 317 aaPredicted RBP16.65■□□□□ 0.26
NLE1-205ENST00000588642 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
NLE1-205ENST00000588642 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
NLE1-205ENST00000588642 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.26
NLE1-205ENST00000588642 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
NLE1-205ENST00000588642 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
NLE1-205ENST00000588642 EPS15P42566 896 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 KIF4BQ2VIQ3 1234 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
NLE1-205ENST00000588642 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
NLE1-205ENST00000588642 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 FAM198AQ9UFP1 575 aa16.64■□□□□ 0.25
NLE1-205ENST00000588642 ST18O60284 1047 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 ENTPD3O75355 529 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 EGFRP00533 1210 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 CPA1P15085 419 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 RRP12Q5JTH9 1297 aaKnown RBP16.63■□□□□ 0.25
NLE1-205ENST00000588642 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 ZSCAN29Q8IWY8 852 aaPredicted RBP16.63■□□□□ 0.25
NLE1-205ENST00000588642 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
NLE1-205ENST00000588642 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
NLE1-205ENST00000588642 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
NLE1-205ENST00000588642 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 PSME4Q14997 1843 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 GLTPD2A6NH11 291 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 RPS6KB1P23443 525 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 PLCD1P51178 756 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 EVX2Q03828 476 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 KRT23Q9C075 422 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 DHX36Q9H2U1 1008 aaKnown RBP16.62■□□□□ 0.25
NLE1-205ENST00000588642 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
NLE1-205ENST00000588642 PDE4BQ07343 736 aa16.61■□□□□ 0.25
NLE1-205ENST00000588642 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
NLE1-205ENST00000588642 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
NLE1-205ENST00000588642 TRPM4Q8TD43 1214 aa16.61■□□□□ 0.25
NLE1-205ENST00000588642 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
NLE1-205ENST00000588642 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
NLE1-205ENST00000588642 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
NLE1-205ENST00000588642 B4E1Z4 1266 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 PRDM1O75626 825 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
NLE1-205ENST00000588642 MCM5P33992 734 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 TNNI2P48788 182 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 FGD1P98174 961 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 BECN1Q14457 450 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
NLE1-205ENST00000588642 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 NEDD4P46934 1319 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 SBF1O95248 1867 aa16.6■□□□□ 0.25
NLE1-205ENST00000588642 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 RANBP6O60518 1105 aaKnown RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 KDM4AO75164 1064 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms