RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 GAKO14976 1311 aa16.95■□□□□ 0.3
HDAC5-208ENST00000588419 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 CYP2C8P10632 490 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 PSMC4P43686 418 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 C17orf99Q6UX52 265 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
HDAC5-208ENST00000588419 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
HDAC5-208ENST00000588419 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
HDAC5-208ENST00000588419 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-208ENST00000588419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.94■□□□□ 0.3
HDAC5-208ENST00000588419 MKI67P46013 3256 aaKnown RBP16.94■□□□□ 0.3
HDAC5-208ENST00000588419 ATRNL1Q5VV63 1379 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
HDAC5-208ENST00000588419 ENTPD3O75355 529 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 BCAR3O75815 825 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 TRIM27P14373 513 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 CTGFP29279 349 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 MECOMQ03112 1051 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 RAET1EQ8TD07 263 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 ARHGAP45Q92619 1136 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 IDI2Q9BXS1 227 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 ZHX2Q9Y6X8 837 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
HDAC5-208ENST00000588419 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
HDAC5-208ENST00000588419 GNAI2P04899 355 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 OSBPP22059 807 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
HDAC5-208ENST00000588419 GCC1Q96CN9 775 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
HDAC5-208ENST00000588419 ADGRA2Q96PE1 1338 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 LOC285556D6RIA3 1793 aa16.92■□□□□ 0.3
HDAC5-208ENST00000588419 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 TRIM75PA6NK02 468 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 GNRH1P01148 92 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 PTPRAP18433 802 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDAC5-208ENST00000588419 MOGSQ13724 837 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 ATF7IPQ6VMQ6 1270 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 BIN2Q9UBW5 565 aaPredicted RBP16.91■□□□□ 0.3
HDAC5-208ENST00000588419 SRRDQ9UH36 339 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
HDAC5-208ENST00000588419 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 CXCL11O14625 94 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 HOXD10P28358 340 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 PRMT2P55345 433 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
HDAC5-208ENST00000588419 MTX1Q13505 466 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 MTFR1Q15390 333 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 SPATA5Q8NB90 893 aa16.9■□□□□ 0.3
HDAC5-208ENST00000588419 A0A0G2JLL6 359 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-208ENST00000588419 FCGRTP55899 365 aa16.89■□□□□ 0.29
HDAC5-208ENST00000588419 GSTO1P78417 241 aa16.89■□□□□ 0.29
HDAC5-208ENST00000588419 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
HDAC5-208ENST00000588419 PRRT2Q7Z6L0 340 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-208ENST00000588419 SMCR8Q8TEV9 937 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-208ENST00000588419 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.89■□□□□ 0.295e-6■■■□□ 17
HDAC5-208ENST00000588419 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
HDAC5-208ENST00000588419 MYH1P12882 1939 aa16.89■□□□□ 0.29
HDAC5-208ENST00000588419 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 GRK4P32298 578 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 PRKCZQ05513 592 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
HDAC5-208ENST00000588419 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 SNRKQ9NRH2 765 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
HDAC5-208ENST00000588419 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
HDAC5-208ENST00000588419 LDHCP07864 332 aa16.87■□□□□ 0.29
HDAC5-208ENST00000588419 ARID4AP29374 1257 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-208ENST00000588419 MCAMP43121 646 aa16.87■□□□□ 0.29
HDAC5-208ENST00000588419 RHBDL3P58872 404 aa16.87■□□□□ 0.29
HDAC5-208ENST00000588419 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
HDAC5-208ENST00000588419 NSUN4Q96CB9 384 aaKnown RBP16.87■□□□□ 0.29
HDAC5-208ENST00000588419 FAM163AQ96GL9 167 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-208ENST00000588419 BCRP11274 1271 aa16.86■□□□□ 0.29
HDAC5-208ENST00000588419 HABP4Q5JVS0 413 aaKnown RBP16.86■□□□□ 0.29
HDAC5-208ENST00000588419 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
HDAC5-208ENST00000588419 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
HDAC5-208ENST00000588419 GABRQQ9UN88 632 aa16.86■□□□□ 0.29
HDAC5-208ENST00000588419 ZBTB22O15209 634 aa16.85■□□□□ 0.29
HDAC5-208ENST00000588419 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
HDAC5-208ENST00000588419 CCL5P13501 91 aa16.85■□□□□ 0.29
HDAC5-208ENST00000588419 UBXN2AP68543 259 aa16.85■□□□□ 0.29
HDAC5-208ENST00000588419 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
HDAC5-208ENST00000588419 SH3RF3Q8TEJ3 882 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms