RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LETM1O95202 739 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-203ENST00000588210 MCAMP43121 646 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-203ENST00000588210 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
CCDC43-203ENST00000588210 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 TTF2Q9UNY4 1162 aaKnown RBP17.25■□□□□ 0.35
CCDC43-203ENST00000588210 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 EGFRP00533 1210 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-203ENST00000588210 CPA1P15085 419 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
CCDC43-203ENST00000588210 SCARF1Q14162 830 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 MAST3O60307 1309 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 HDLBPQ00341 1268 aaKnown RBP17.24■□□□□ 0.35
CCDC43-203ENST00000588210 FSTL1Q12841 308 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 MTMR14Q8NCE2 650 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 UBE2Q2Q8WVN8 375 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 MRIQ9BWK5 157 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 SERPINA10Q9UK55 444 aa17.24■□□□□ 0.35
CCDC43-203ENST00000588210 LDHBP07195 334 aaKnown RBP17.23■□□□□ 0.35
CCDC43-203ENST00000588210 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-203ENST00000588210 GJB2P29033 226 aa17.23■□□□□ 0.35
CCDC43-203ENST00000588210 GRIK5Q16478 980 aa17.23■□□□□ 0.35
CCDC43-203ENST00000588210 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-203ENST00000588210 PI16Q6UXB8 463 aa17.23■□□□□ 0.35
CCDC43-203ENST00000588210 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
CCDC43-203ENST00000588210 MTMR6Q9Y217 621 aa17.23■□□□□ 0.35
CCDC43-203ENST00000588210 RBM8AQ9Y5S9 174 aaKnown RBP17.23■□□□□ 0.35
CCDC43-203ENST00000588210 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 DLGAP5Q15398 846 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC43-203ENST00000588210 MAP4K1Q92918 833 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 WNT10BO00744 389 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 PRDX5P30044 214 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 NMIQ13287 307 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-203ENST00000588210 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 AKAP11Q9UKA4 1901 aa17.22■□□□□ 0.35
CCDC43-203ENST00000588210 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
CCDC43-203ENST00000588210 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-203ENST00000588210 IGSF3O75054 1194 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 ZAP70P43403 619 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 CRKP46108 304 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCDC43-203ENST00000588210 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 FAM227BQ96M60 508 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 FIBPO43427 364 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 ATP5JP18859 108 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 PSMA5P28066 241 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-203ENST00000588210 ME3Q16798 604 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 MAP1SQ66K74 1059 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-203ENST00000588210 HHIPL2Q6UWX4 724 aa17.2■□□□□ 0.34
CCDC43-203ENST00000588210 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 SLC27A2O14975 620 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 DCPSQ96C86 337 aaKnown RBP17.19■□□□□ 0.34
CCDC43-203ENST00000588210 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 MYO1BO43795 1136 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
CCDC43-203ENST00000588210 PRMT6Q96LA8 375 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-203ENST00000588210 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-203ENST00000588210 LRP2BPQ9P2M1 347 aa17.19■□□□□ 0.34
CCDC43-203ENST00000588210 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 LAMA4Q16363 1823 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 ANGEL2Q5VTE6 544 aaKnown RBP17.18■□□□□ 0.34
CCDC43-203ENST00000588210 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 ZDHHC15Q96MV8 337 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 FUCA2Q9BTY2 467 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 GGA3Q9NZ52 723 aa17.18■□□□□ 0.34
CCDC43-203ENST00000588210 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-203ENST00000588210 PTMAP06454 111 aaKnown RBP17.17■□□□□ 0.34
CCDC43-203ENST00000588210 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-203ENST00000588210 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 ASTN2O75129 1339 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-203ENST00000588210 MECOMQ03112 1051 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
CCDC43-203ENST00000588210 ANKRD1Q15327 319 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
CCDC43-203ENST00000588210 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 NSUN4Q96CB9 384 aaKnown RBP17.16■□□□□ 0.34
CCDC43-203ENST00000588210 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-203ENST00000588210 HAUS7Q99871 368 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
CCDC43-203ENST00000588210 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms