RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 INHBEP58166 350 aa23.29■■□□□ 1.32
TPM4-204ENST00000586499 ADGRA1Q86SQ6 560 aa23.29■■□□□ 1.32
TPM4-204ENST00000586499 IFNL1Q8IU54 200 aa23.29■■□□□ 1.32
TPM4-204ENST00000586499 CLASRPQ8N2M8 674 aaKnown RBP23.29■■□□□ 1.32
TPM4-204ENST00000586499 OTUD5Q96G74 571 aa23.29■■□□□ 1.32
TPM4-204ENST00000586499 ANTXR1Q9H6X2 564 aa23.29■■□□□ 1.32
TPM4-204ENST00000586499 RAB11FIP3O75154 756 aa23.28■■□□□ 1.32
TPM4-204ENST00000586499 RRP1P56182 461 aaKnown RBP23.28■■□□□ 1.32
TPM4-204ENST00000586499 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
TPM4-204ENST00000586499 MS4A4AQ96JQ5 239 aa23.28■■□□□ 1.32
TPM4-204ENST00000586499 SH3RF3Q8TEJ3 882 aaPredicted RBP23.27■■□□□ 1.32
TPM4-204ENST00000586499 PTPN18Q99952 460 aa23.27■■□□□ 1.32
TPM4-204ENST00000586499 AATFQ9NY61 560 aaKnown RBP eCLIP23.27■■□□□ 1.32
TPM4-204ENST00000586499 ZNF112Q9UJU3 913 aa23.27■■□□□ 1.32
TPM4-204ENST00000586499 SPDYE5A6NIY4 337 aa23.26■■□□□ 1.31
TPM4-204ENST00000586499 IFIT2P09913 472 aaKnown RBP23.26■■□□□ 1.31
TPM4-204ENST00000586499 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
TPM4-204ENST00000586499 TESPA1A2RU30 521 aaPredicted RBP23.25■■□□□ 1.31
TPM4-204ENST00000586499 IDH1O75874 414 aaKnown RBP23.25■■□□□ 1.31
TPM4-204ENST00000586499 DGKZQ13574 1117 aa23.25■■□□□ 1.31
TPM4-204ENST00000586499 ERO1BQ86YB8 467 aa23.25■■□□□ 1.31
TPM4-204ENST00000586499 TEX11Q8IYF3 940 aa23.25■■□□□ 1.31
TPM4-204ENST00000586499 MCOLN1Q9GZU1 580 aa23.25■■□□□ 1.31
TPM4-204ENST00000586499 LAMB1P07942 1786 aa23.24■■□□□ 1.31
TPM4-204ENST00000586499 SMARCA5O60264 1052 aaPredicted RBP23.24■■□□□ 1.31
TPM4-204ENST00000586499 ZNF296Q8WUU4 475 aaPredicted RBP23.24■■□□□ 1.31
TPM4-204ENST00000586499 BRI3BPQ8WY22 251 aa23.24■■□□□ 1.31
TPM4-204ENST00000586499 ABHD8Q96I13 439 aa23.24■■□□□ 1.31
TPM4-204ENST00000586499 NOL10Q9BSC4 688 aaKnown RBP23.24■■□□□ 1.31
TPM4-204ENST00000586499 MAST2Q6P0Q8 1798 aa23.24■■□□□ 1.31
TPM4-204ENST00000586499 CCL15-CCL14A0A0B4J2E2 113 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 PHF20L1A8MW92 1017 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 GPR25O00155 361 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 IRF6O14896 467 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 MAP4K4O95819 1239 aaPredicted RBP23.23■■□□□ 1.31
TPM4-204ENST00000586499 ALDH1A1P00352 501 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 CYP7A1P22680 504 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 DYNLL1P63167 89 aaKnown RBP23.23■■□□□ 1.31
TPM4-204ENST00000586499 CCL15Q16663 113 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 DOCK2Q92608 1830 aa23.23■■□□□ 1.31
TPM4-204ENST00000586499 NPM3O75607 178 aaKnown RBP23.22■■□□□ 1.31
TPM4-204ENST00000586499 BAG3O95817 575 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 GTF2A2P52657 109 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 PPP4CP60510 307 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 MAGEB6Q8N7X4 407 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 CFHR5Q9BXR6 569 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 OSBPL5Q9H0X9 879 aaPredicted RBP23.22■■□□□ 1.31
TPM4-204ENST00000586499 PCDHB15Q9Y5E8 787 aa23.22■■□□□ 1.31
TPM4-204ENST00000586499 FAM196BA6NMK8 535 aa23.21■■□□□ 1.31
TPM4-204ENST00000586499 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
TPM4-204ENST00000586499 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
TPM4-204ENST00000586499 PPATQ06203 517 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 CRHR2Q13324 411 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 PPIL2Q13356 520 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 OTUD7BQ6GQQ9 843 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 TGFBRAP1Q8WUH2 860 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
TPM4-204ENST00000586499 CRBNQ96SW2 442 aa23.2■■□□□ 1.3
TPM4-204ENST00000586499 DNAJC2Q99543 621 aaKnown RBP23.2■■□□□ 1.3
TPM4-204ENST00000586499 MAP3K12Q12852 859 aa23.19■■□□□ 1.3
TPM4-204ENST00000586499 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
TPM4-204ENST00000586499 MAPKAPK5Q8IW41 473 aa23.19■■□□□ 1.3
TPM4-204ENST00000586499 FAM43AQ8N2R8 423 aa23.19■■□□□ 1.3
TPM4-204ENST00000586499 DCTPP1Q9H773 170 aa23.19■■□□□ 1.3
TPM4-204ENST00000586499 GOLIM4O00461 696 aa23.18■■□□□ 1.3
TPM4-204ENST00000586499 IGSF3O75054 1194 aa23.18■■□□□ 1.3
TPM4-204ENST00000586499 PLCG2P16885 1265 aa23.18■■□□□ 1.3
TPM4-204ENST00000586499 NOM1Q5C9Z4 860 aaKnown RBP23.18■■□□□ 1.3
TPM4-204ENST00000586499 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.18■■□□□ 1.3
TPM4-204ENST00000586499 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
TPM4-204ENST00000586499 FKTNO75072 461 aa23.17■■□□□ 1.3
TPM4-204ENST00000586499 CETPP11597 493 aa23.17■■□□□ 1.3
TPM4-204ENST00000586499 SNAPC2Q13487 334 aa23.17■■□□□ 1.3
TPM4-204ENST00000586499 CTU1Q7Z7A3 348 aaKnown RBP23.17■■□□□ 1.3
TPM4-204ENST00000586499 SCYL3Q8IZE3 742 aa23.17■■□□□ 1.3
TPM4-204ENST00000586499 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.17■■□□□ 1.3
TPM4-204ENST00000586499 FLT1P17948 1338 aa23.16■■□□□ 1.3
TPM4-204ENST00000586499 TBC1D12O60347 775 aa23.16■■□□□ 1.3
TPM4-204ENST00000586499 ATP5JP18859 108 aa23.16■■□□□ 1.3
TPM4-204ENST00000586499 TTF1Q15361 905 aaPredicted RBP23.16■■□□□ 1.3
TPM4-204ENST00000586499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.16■■□□□ 1.3
TPM4-204ENST00000586499 CDK5RAP2Q96SN8 1893 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 BTBD19C9JJ37 291 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 PTPRAP18433 802 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 SLC9C2Q5TAH2 1124 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 CCDC84Q86UT8 332 aaPredicted RBP23.15■■□□□ 1.3
TPM4-204ENST00000586499 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
TPM4-204ENST00000586499 KCNH4Q9UQ05 1017 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
TPM4-204ENST00000586499 COL2A1P02458 1487 aaPredicted RBP23.15■■□□□ 1.3
TPM4-204ENST00000586499 CTNND1O60716 968 aaKnown RBP23.14■■□□□ 1.29
TPM4-204ENST00000586499 RRP1BQ14684 758 aaKnown RBP23.14■■□□□ 1.29
TPM4-204ENST00000586499 TAF1CQ15572 869 aaPredicted RBP23.14■■□□□ 1.29
TPM4-204ENST00000586499 SLC4A8Q2Y0W8 1093 aa23.14■■□□□ 1.29
TPM4-204ENST00000586499 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
TPM4-204ENST00000586499 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.29
TPM4-204ENST00000586499 PALD1Q9ULE6 856 aa23.14■■□□□ 1.29
TPM4-204ENST00000586499 CCDC85CA6NKD9 419 aa23.13■■□□□ 1.29
TPM4-204ENST00000586499 PDE6AP16499 860 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms