RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 BTDP43251 543 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 CAP1Q01518 475 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 KIF22Q14807 665 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 ZFPM1Q8IX07 1006 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 CDK5RAP2Q96SN8 1893 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 GPR108Q9NPR9 543 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
HDAC5-203ENST00000586339 MYO5AQ9Y4I1 1855 aaKnown RBP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.34■□□□□ 0.37
HDAC5-203ENST00000586339 CXCL11O14625 94 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 GSTO1P78417 241 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 LACTBP83111 547 aaPredicted RBP17.33■□□□□ 0.36
HDAC5-203ENST00000586339 MECOMQ03112 1051 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 POLA2Q14181 598 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
HDAC5-203ENST00000586339 PHF20L1A8MW92 1017 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 SLC34A2O95436 690 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 LDHCP07864 332 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 PRMT2P55345 433 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 C17orf99Q6UX52 265 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
HDAC5-203ENST00000586339 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
HDAC5-203ENST00000586339 SCYL3Q8IZE3 742 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
HDAC5-203ENST00000586339 ADGRA2Q96PE1 1338 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 IGSF3O75054 1194 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 RHBDL3P58872 404 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 NSUN4Q96CB9 384 aaKnown RBP17.31■□□□□ 0.36
HDAC5-203ENST00000586339 ZNF333Q96JL9 665 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 PARK7Q99497 189 aaKnown RBP17.31■□□□□ 0.36
HDAC5-203ENST00000586339 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
HDAC5-203ENST00000586339 PICK1Q9NRD5 415 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
HDAC5-203ENST00000586339 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
HDAC5-203ENST00000586339 PDHXO00330 501 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 CTNND1O60716 968 aaKnown RBP17.3■□□□□ 0.36
HDAC5-203ENST00000586339 MCAMP43121 646 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 PICALMQ13492 652 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 MOGSQ13724 837 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 SLC9C1Q4G0N8 1177 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
HDAC5-203ENST00000586339 CEP290O15078 2479 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-203ENST00000586339 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 TBC1D12O60347 775 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 PTPRAP18433 802 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
HDAC5-203ENST00000586339 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-203ENST00000586339 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 LOC285556D6RIA3 1793 aa17.29■□□□□ 0.36
HDAC5-203ENST00000586339 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-203ENST00000586339 TNNI3KQ59H18 835 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 ARHGAP39Q9C0H5 1083 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 SLC45A1Q9Y2W3 748 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 AFG3L2Q9Y4W6 797 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 FPGT-TNNI3KV9GXZ4 949 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 DOCK3Q8IZD9 2030 aa17.28■□□□□ 0.36
HDAC5-203ENST00000586339 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 GPAT2Q6NUI2 795 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-203ENST00000586339 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
HDAC5-203ENST00000586339 TMEM106CQ9BVX2 250 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 OSBPL5Q9H0X9 879 aaPredicted RBP17.27■□□□□ 0.36
HDAC5-203ENST00000586339 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 CPA4Q9UI42 421 aa17.27■□□□□ 0.36
HDAC5-203ENST00000586339 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.36
HDAC5-203ENST00000586339 ZBTB7BO15156 539 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-203ENST00000586339 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
HDAC5-203ENST00000586339 PLCG2P16885 1265 aa17.26■□□□□ 0.35
HDAC5-203ENST00000586339 HOXD10P28358 340 aa17.26■□□□□ 0.35
HDAC5-203ENST00000586339 MYH1P12882 1939 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 BCRP11274 1271 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 RLBP1P12271 317 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 PSMC4P43686 418 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 TEX11Q8IYF3 940 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 TBC1D2Q9BYX2 928 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.35
HDAC5-203ENST00000586339 SRRDQ9UH36 339 aa17.25■□□□□ 0.35
HDAC5-203ENST00000586339 BAG3O95817 575 aa17.24■□□□□ 0.35
HDAC5-203ENST00000586339 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
HDAC5-203ENST00000586339 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
HDAC5-203ENST00000586339 HERC5Q9UII4 1024 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms