RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 STK36Q9NRP7 1315 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 EVA1CP58658 441 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LRP6O75581 1613 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 XIRP1Q702N8 1843 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 MYO1BO43795 1136 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PDE8AO60658 829 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 UBASH3AP57075 661 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LPIN2Q92539 896 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■□□□□ 10.3
CDK5RAP3-237ENST00000585163 KCNH3Q9ULD8 1083 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 V9GYY5 206 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 FGFR2P21802 821 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 KRBA2Q6ZNG9 492 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ELOA2Q8IYF1 753 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ELF2Q15723 593 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 DPF2Q92785 391 aa16.35■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 NID2Q14112 1375 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 UBE2Q2LH0YL09 131 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SERPINC1P01008 464 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 IFNAR1P17181 557 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 NOSTRINQ8IVI9 506 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 NAPBQ9H115 298 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CCP110O43303 1012 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 FBXO38Q6PIJ6 1188 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 WASF1Q92558 559 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TAOK2Q9UL54 1235 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LRP5O75197 1615 aa16.34■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CHD4Q14839 1912 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 CFAP100Q494V2 611 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 VSTM4Q8IW00 320 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ITGB4P16144 1822 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MBD4O95243 580 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MAP3K12Q12852 859 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 AKNAD1Q5T1N1 836 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 KRT23Q9C075 422 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FANCLQ9NW38 375 aa16.33■□□□□ 0.2
CDK5RAP3-237ENST00000585163 NUP98P52948 1817 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 DOCK2Q92608 1830 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MMP1P03956 469 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 BMP6P22004 513 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ETF1P62495 437 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 GSG1L2A8MUP6 293 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-237ENST00000585163 KIF20AO95235 890 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 FAM53CQ9NYF3 392 aa16.31■□□□□ 0.2
CDK5RAP3-237ENST00000585163 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms